| Name | Short Code | Functional Group |
|---|---|---|
| Acropora (branching) | Acr_BR | Hard coral |
| Acropora (tabulate) | Acr_TA | Hard coral |
| Agaricia spp. | Agaric_EN | Hard coral |
| Agaricia | Agaric_FO | Hard coral |
| Agariciidae | Agaric_MA | Hard coral |
| CRED-Goniopora/Alveopora spp | AlvGon_CO | Hard coral |
| Alveopora_encrusting | AlvGon_EN | Hard coral |
| Astreopora | Astreo | Hard coral |
| Bleached Hard Coral | Bleach_HC | Hard coral |
| Brain Corals | Brain_EN | Hard coral |
| Meandroid (brain) corals | Brain_MA | Hard coral |
| Echinopora_encrusting | EchDipE_EN | Hard coral |
| Diploastrea_massive | EchDipE_MA | Hard coral |
| Echinopora Branching | Echinop_BR | Hard coral |
| Favites_encrusting | fFav_EN | Hard coral |
| Favites_massive | fFav_MA | Hard coral |
| Galaxea | Galaxea | Hard coral |
| Goniastrea | Goniastrea | Hard coral |
| Hard Coral (branching) | HC_BR | Hard coral |
| Hard Coral (columnar) | HC_CO | Hard coral |
| Hard Coral (encrusting) | HC_EN | Hard coral |
| Hard Coral (foliose) | HC_FO | Hard coral |
| Hard Coral (free-living) | HC_FREE | Hard coral |
| Hard Coral (massive) | HC_MA | Hard coral |
| Hard Coral Solitary | HC_SOL | Hard coral |
| Unknown Hard Coral | HC_UNK | Hard coral |
| Lobophyllia | Lobophyl | Hard coral |
| Montipora (branching) | Monti_BR | Hard coral |
| Montipora (encrusting) | Monti_EN | Hard coral |
| Montipora (foliose) | Monti_FO | Hard coral |
| Montipora_massive | Monti_MA | Hard coral |
| Tubastrea | Phaceloid | Hard coral |
| Plerogyra | Plerog | Hard coral |
| Pocillopora | Pocill | Hard coral |
| Porites (branching) | Por_BR | Hard coral |
| Porites_columnar | Por_CO | Hard coral |
| Porites_encrusting | Por_EN | Hard coral |
| Porites_foliose | Por_FO | Hard coral |
| Porites (massive) | Por_MA | Hard coral |
| Seriatopora | Seriatop | Hard coral |
| Stylophora | Styloph | Hard coral |
| Turbinaria (coral) | Turbinaria | Hard coral |
| Anemone | Anemone | Other Invertebrates |
| Bivalve | Bivalve | Other Invertebrates |
| Black Coral 1 | Blk_Coral | Other Invertebrates |
| Crown of Thorns Sea Star | COTS | Other Invertebrates |
| Tridacna: Giant clam | GiCl | Other Invertebrates |
| Tridacna Giant Clam tissue | GiCl Ti | Other Invertebrates |
| Holothuria | Holo | Other Invertebrates |
| Hydrocoral | Hydrocoral | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Echinoderms | Sea Star | Other Invertebrates |
| CRED-Unclassified soft coral | Soft Coral | Other Invertebrates |
| Sponge | Sponge | Other Invertebrates |
| Encrusting sponge | Sponge_EN | Other Invertebrates |
| Sponges: Massive forms: Barrels | Sponge_MB | Other Invertebrates |
| CRED-Unclassified sessile invertebrate | Uncl SI | Other Invertebrates |
| Echinoderms: sea urchin | Urchin | Other Invertebrates |
| Long spines sea urchin | Urch_LSP | Other Invertebrates |
| XENIIDAE | Xeniidae | Other Invertebrates |
| Zoanthid | Zoanthid | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| sediment (fine) | Sed Fine | Soft Substrate |
| Bare Rock | Bare Rock | Hard Substrate |
| Bare Rubble | Bare Rub | Hard Substrate |
| Dead coral | Dead HC | Hard Substrate |
| Rhodoliths | Rhodo | Hard Substrate |
| Dead coral with turf algae | TRF_DHC | Hard Substrate |
| Rock Turf Algae | TRF_Rock | Hard Substrate |
| Dead Clam Shell | Dead Clam | Other |
| Debris | Debris | Other |
| GAP_SFM | GAP_SFM | Other |
| Mobile fauna | Mbl Fauna | Other |
| No_data | NoDa | Other |
| Shadow | SHAD | Other |
| TAPE | TAPE | Other |
| Unknown | UNK | Other |
| Wand | WAND | Other |
| Blue-Green Algae | BLGR | Algae |
| Caulerpa | Caulerpa | Algae |
| CCA: On dead coral | CCA_DHC | Algae |
| CCA growing on hard substrate | CCA_H | Algae |
| CCA growing on rubble | CCA_Rub | Algae |
| Dictyota | Dictyota | Algae |
| CRED-Encrusting macroalgae | EMA | Algae |
| Halimeda | Halimeda | Algae |
| CRED-Brown macroalgae | MA_Brn | Algae |
| CRED-Green macroalgae | MA_Grn | Algae |
| Macroalgae: Laminate: red: peysonnelia | MA_LRP | Algae |
| CRED-Red macroalgae | MA_Red | Algae |
| CRED-Upright macroalgae | MA_Up | Algae |
| Padina | Padina | Algae |
| Turf on rubble | TRF_Rub | Algae |
| turf_sedimented | TRF_Sed | Algae |
| Thick turf algae | TRF_Thick | Algae |
| Turbinaria (algae) | Turbin | Algae |
| Tydemania spp. | Tydem | Algae |
| Seagrass | Seagrass | Seagrass |