| Name | Short Code | Functional Group |
|---|---|---|
| Bleached Montipora capitata | BMCAP | Hard coral |
| Bleached Porites compressa | BPCOM | Hard coral |
| Bleached Pocillopora damacornis | BPDAM | Hard coral |
| Lobactis scutaria | FSCU | Hard coral |
| Fungia scutaria bleached | Funscu BL | Hard coral |
| Leptastrea purpurea bleached | Leppur BL | Hard coral |
| Leptastrea purpurea | LPurp | Hard coral |
| Montipora capitata | MCAP | Hard coral |
| Porites compressa | PCOM | Hard coral |
| Pocillopora damicornis | PDAM | Hard coral |
| Recent Dead Coral | REDC | Hard coral |
| Holothuria | Holo | Other Invertebrates |
| Opheodesoma spectabilis | Ospec | Other Invertebrates |
| Palythoa | PALYTHO | Other Invertebrates |
| Porifera | Prfa | Other Invertebrates |
| Tunicate | Tnce | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Silt/Clay | SI | Soft Substrate |
| Bare Substrate | Bare-Subst | Hard Substrate |
| Shell/ Shell Hash | Shell | Hard Substrate |
| All other | Other | Other |
| Broken coral rubble | Rubble | Other |
| ARMS-CREP-Unavailable | _UNAV | Other |
| Unknown | Unk | Other |
| Acanthophora spicifera | ASPIC | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Dictyosphaeria | DICTY | Algae |
| Gracilaria salicornia | GSAL | Algae |
| Macroalgae | Macro | Algae |
| Nemacystus decipiens | Ndec | Algae |
| Spyridia filamentosa | SPYR | Algae |
| Turf algae | Turf | Algae |