| Name | Short Code | Functional Group |
|---|---|---|
| Acropora cytherea | AcrCyth | Hard coral |
| Acropora digitifera | ACRdi | Hard coral |
| Acropora (digitate) | Acr_dig | Hard coral |
| Acropora divaricata | AcrDiv | Hard coral |
| Acropora hyacinthus | AcrHya | Hard coral |
| Acropora | Acropora | Hard coral |
| Acropora spp._staghorn | ACSTA | Hard coral |
| Astrea | Astrea | Hard coral |
| Bleached Acropora | B_Acro | Hard coral |
| Bleached Acropora Digitate | BlAcrDig | Hard coral |
| Porites finger -Dead | CD-PFIN | Hard coral |
| dead Acropora digitifera | DADG | Hard coral |
| Dead Acropora | Dead Acrop | Hard coral |
| Dead Pocillopora | D_Pocillo | Hard coral |
| Favia | fav | Hard coral |
| Fungia | Fungia | Hard coral |
| Lobophyllia corymbosa | Lob_cor | Hard coral |
| Leptastrea purpurea | LPurp | Hard coral |
| Montipora | Monti | Hard coral |
| Montipora capitata | MontiCap | Hard coral |
| Montipora patula | MontiPat | Hard coral |
| Non hermatypic: Millepora (Fire coral) | NN_MIL | Hard coral |
| Pavona cactus | PavCac | Hard coral |
| Pavona varians | PavVar | Hard coral |
| Pocillopora damicornis | PocDam | Hard coral |
| Pocillopora grandis (eydouxi) | PocGran | Hard coral |
| Pocillopora | Pocill | Hard coral |
| Pocillopora meandrina | PocMea | Hard coral |
| Pocillopora verrucosa | PocVer | Hard coral |
| Porites Dead | POD | Hard coral |
| Porites compressa | PorComp | Hard coral |
| Porites cylindrica | PorCyl | Hard coral |
| Porites | Porites | Hard coral |
| Porites lobata | PorLob | Hard coral |
| Porites lobata bleached | Porlob BL | Hard coral |
| Porites rus | PorRus | Hard coral |
| Porites massive pale or partially bleached | PPorites | Hard coral |
| Millepora | Millepora | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Hard Substrate | HS | Hard Substrate |
| Porites spp. massive_recently dead | POMA_RD | Hard Substrate |
| Porites porites dead | POPdead | Hard Substrate |
| Porites spp. other, recently dead | POR_RD | Hard Substrate |
| rubble coral | Rbble | Hard Substrate |
| Asparagopsis | Asparago | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Halimeda | Halimeda | Algae |
| Macroalgae: Laminate: brown: padina | MLBPadina | Algae |
| Porites lobata, recently dead | PLOB_RD | Algae |
| Turf algae | Turf | Algae |
| Turf and sand | Turf_sand | Algae |