| Name | Short Code | Functional Group |
|---|---|---|
| Bleaching | BLC | Hard coral |
| Coral Growth Anomaly | CGroAnom | Hard coral |
| Diseased Coral | DISCORAL | Hard coral |
| Montipora capitata tissue loss | Moncap TL | Hard coral |
| Montipora capitata trematodiasis | Moncap TR | Hard coral |
| Montipora capitata | MontiCap | Hard coral |
| Porites compressa | PorComp | Hard coral |
| Porites compressa tissue loss | Porcom TL | Hard coral |
| Porites compressa trematodiasis | Porcom TR | Hard coral |
| Sand | Sand | Soft Substrate |
| Dead coral | D_coral | Hard Substrate |
| Coral:Rock | Rc | Hard Substrate |
| Broken coral rubble | C-Rubble | Other |
| Other | O | Other |
| Predation | Predation | Other |
| Transect | TR | Other |
| Other Algae | ALG_OTH | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Macroalgae | MAL | Algae |
| Turf algae | Turf | Algae |