| Name | Short Code | Functional Group |
|---|---|---|
| Astrangia | Astran | Hard coral |
| Madracis decactis | MadDeca | Hard coral |
| Mussismilia hispida | MuHi | Hard coral |
| Porites astreoides | PorAstr | Hard coral |
| Siderastrea | Siderastr | Hard coral |
| Tubastraea | Tubastraea | Hard coral |
| Arbacia lixula | A_lixula | Other Invertebrates |
| Anemone | Anemone | Other Invertebrates |
| Ascidian (colonial) | ASCD_col | Other Invertebrates |
| Ascidian (solitary) | ASCD_sol | Other Invertebrates |
| Bivalve | Bivalve | Other Invertebrates |
| Bryozoan | bryozoan | Other Invertebrates |
| Carijoa riisei | CARI | Other Invertebrates |
| Crinoidea | CRI | Other Invertebrates |
| Echinometra lucunter | EchL | Other Invertebrates |
| Encrusting sponge | ENSP | Other Invertebrates |
| Epizoanthus_arborescent | epiarb | Other Invertebrates |
| Erect sponge | ERSP | Other Invertebrates |
| Millepora alcicornis | MILA | Other Invertebrates |
| Paracentrotus gaimardi | ParGai | Other Invertebrates |
| Palythoa caribaeorum | PCAR | Other Invertebrates |
| Perna perna | Perna | Other Invertebrates |
| Phyllogorgia dilatata | PHDI | Other Invertebrates |
| Sponge: Cliona | SINV_SPO_C | Other Invertebrates |
| Sponge Other | SpgOth | Other Invertebrates |
| Sponge (massive) | SP_mass | Other Invertebrates |
| Aplysina spp | SPON-APLY4 | Other Invertebrates |
| Common Seastar | STAR | Other Invertebrates |
| Echinoderms: sea urchin | Urchins | Other Invertebrates |
| Zoanthus | ZOA | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Other | O | Other |
| Tape/Quadrat/Shadow | TQS | Other |
| Amphiroa sp. | Amphi | Algae |
| Asparagopsis | Asparago | Algae |
| Brown turfing algae | BTA | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Codium | Cod | Algae |
| Colpomenia sinuosa | ColSin | Algae |
| Dictyota | Dictyota | Algae |
| Gelidium spp | GLD | Algae |
| Green turfing algae | GTA | Algae |
| Hypnea musciformis | HMUS | Algae |
| Hypnea spinella | Hyspi | Algae |
| Laurencia spp. | Limu | Algae |
| Padina | Padina | Algae |
| Plocamium spp. | PLOC | Algae |
| Pterocladiella capillacea | Pteroc | Algae |
| Red Turf | RedTurf | Algae |
| Sargassum | Sargassum | Algae |
| Turf algae | Turf | Algae |
| Turf and sand | Turf_sand | Algae |
| Udotea spp. | UDOT | Algae |
| Ulva | Ulva | Algae |