| Name | Short Code | Functional Group |
|---|---|---|
| Corals: Stony corals | CSC | Hard coral |
| Pocillopora | Pocill | Hard coral |
| Porites rus | PORR | Hard coral |
| Discosoma | DiscoS | Other Invertebrates |
| Heliopora | Heliop | Other Invertebrates |
| Palythoa | PALYTHO | Other Invertebrates |
| Soft Coral Leathery | SCL | Other Invertebrates |
| Sponges: Terpios | SINV_SPO_T | Other Invertebrates |
| Sponge Other | SpgOth | Other Invertebrates |
| Loose Substrate: Sand | LSUB_SAND | Soft Substrate |
| Sand | Sand | Soft Substrate |
| sandy mud | sand_mud | Soft Substrate |
| Sand patches | SandPat | Soft Substrate |
| Sand (soft) | Sand_soft | Soft Substrate |
| Sandy_Substrate | SDSU | Soft Substrate |
| silt | SL* | Soft Substrate |
| Sand/Silt | SSI | Soft Substrate |
| Bare Rock | BARK | Hard Substrate |
| Coral:Rock | Rc | Hard Substrate |
| Rock Crustose Coralline Algae | RCCA | Hard Substrate |
| Rock_Pavement | RckPav | Hard Substrate |
| Rock Turf Algae | RCTA | Hard Substrate |
| Rock | Rock | Hard Substrate |
| Rock Rubble | RockRub | Hard Substrate |
| Coarse Sand | C.Sand | Other |
| Dysidea | Dysi_fragi | Other |
| Sand / Rubble | SaRub | Other |
| TAPE | TAPE | Other |
| Algae (fleshy) | AL_fleshy | Algae |
| Algae: Other | ALGAE_OTH | Algae |
| Benthic Microalgae on Sand | BMA_sand | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Crustose coralline algae | CCA 1 | Algae |
| Cyanobacteria on rock or other substrates | CYANO_Sub | Algae |
| Endolithic Algae on Rock | EdLtAlgRck | Algae |
| Calcifying algae: Halimeda | MACR_Cal_H | Algae |
| Turf and sand | Turf_sand | Algae |