| Name | Short Code | Functional Group |
|---|---|---|
| Acropora (arborescent) | Acr_arb | Hard coral |
| Acropora (arborescent table) | Acr_arbTab | Hard coral |
| Acropora spp._staghorn | ACSTA | Hard coral |
| Astreopora | Astreo | Hard coral |
| Bleached Hard Coral | B_HC | Hard coral |
| Acropora cytheria | cytheria | Hard coral |
| Diploastrea | Diplo | Hard coral |
| Gardineroseris | Gardineros | Hard coral |
| Goniopora | Goniopora | Hard coral |
| Isopora | Isopora | Hard coral |
| Leptastrea | Lepta | Hard coral |
| Leptoria | Leptoria | Hard coral |
| Leptoseris | Leptoseris | Hard coral |
| Merulina | Merulina | Hard coral |
| Montastrea cavernosa | MoCav | Hard coral |
| Montipora | Monti | Hard coral |
| Mycedium | Myc | Hard coral |
| Pachyseris | Pachyseris | Hard coral |
| Pavona | Pavona | Hard coral |
| Pectinia | PEC | Hard coral |
| Platygyra | Platy | Hard coral |
| Pocillopora | Pocill | Hard coral |
| Porites (branching) | Por_branch | Hard coral |
| Porites cylindrica | PorCyl | Hard coral |
| Porites | Porites | Hard coral |
| Porites rus | PorRus | Hard coral |
| Stylophora | Styloph | Hard coral |
| Anemone | Anemone | Other Invertebrates |
| Ascidian | ASCD | Other Invertebrates |
| Encrusting sponge | ENSP | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Dead coral | D_coral | Hard Substrate |
| Brown Chrysophyte | chrys_brn | Other |
| Broken coral rubble | C-Rubble | Other |
| Shadow | SHAD | Other |
| CREP-T1 Tape/Wand | *TW | Other |
| Bluegreen algae | BGA | Algae |
| Boodlea | Boodlea | Algae |
| Branching Coralline Algae | BranchCA | Algae |
| CCA: On dead coral | *CCADHC | Algae |
| Chlorodesmis sp. | Chlor | Algae |
| Dichotomaria marginata | Dic_mar | Algae |
| Dictyosphaeria | Dictyosph | Algae |
| Dictyota | Dictyota | Algae |
| Galaxaura | Galaxaura | Algae |
| Halimeda | Halimeda | Algae |
| Lobophora | Lobophora | Algae |
| Macroalgae | MAL | Algae |
| Mastophora_articulated_calcareous | masarc | Algae |
| Padina | Padina | Algae |
| Ralfsia expansa | Rae | Algae |
| Rosenvingea sp. | RSVG | Algae |
| Sargassum | Sargassum | Algae |
| Turbinaria (algae) | Turbin | Algae |
| Turf algae | Turf | Algae |
| Tydemania spp. | Tyd | Algae |
| Valonia spp. | Valspp | Algae |