| Name | Short Code | Functional Group |
|---|---|---|
| Cyphastrea | CYPHA | Hard coral |
| Leptastrea | LEPTA | Hard coral |
| Montipora | MONTI | Hard coral |
| Pavona | PAVON | Hard coral |
| Porites compressa | PCOMP | Hard coral |
| Pocillopora damicornis | PDAM | Hard coral |
| Porites lobata | PLOBA | Hard coral |
| Pocillopora meandrina | PMEAN | Hard coral |
| Pocillopora | POCILL | Hard coral |
| Porites | PORITES | Hard coral |
| Unknown Hard Coral | UNKCORAL | Hard coral |
| Other invertebrate | INVERT | Other Invertebrates |
| Out of focus | OOF | Other Invertebrates |
| Sea cucumber | SC | Other Invertebrates |
| Sponge | SPO | Other Invertebrates |
| Sea Urchin | SU | Other Invertebrates |
| Zoanthid | ZOANTH | Other Invertebrates |
| Sand | SAND | Soft Substrate |
| Cyanobacteria | CYANOB | Other |
| Other | OTHER | Other |
| Broken coral rubble | RUBBLE | Other |
| Shadow | SHAD | Other |
| Unknown | UNKNOWN | Other |
| Avrainvillea amadelpha | AAMA | Algae |
| Unknown macroalgae | ALGA | Algae |
| Acanthophora spicifera | ASPIC | Algae |
| Caulerpa | CAULER | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Dictyota | DICTYO | Algae |
| Dictyosphaeria | DSPHA | Algae |
| Gracilaria salicornia | GSAL | Algae |
| Halimeda | HALI | Algae |
| Hypnea | HYPN | Algae |
| Laurencia spp. | LAUR | Algae |
| Lyngbya majuscula | LMAJUS | Algae |
| Padina | PADI | Algae |
| Spyridia filamentosa | SFILA | Algae |
| Turf algae | TURF | Algae |