| Name | Short Code | Functional Group |
|---|---|---|
| Acanthastrea | Acantha | Hard coral |
| Acropora (branching) | Acr_bra | Hard coral |
| Acropora (encrusting) | Acr_enc | Hard coral |
| Acropora (tabulate) | Acr_tab | Hard coral |
| Astreopora | Astreo | Hard coral |
| Bleached Acropora branching | B_Acr_bra | Hard coral |
| Bleached Acropora tabulate | B_Acr_tab | Hard coral |
| Bleached Montipora | B_Monti | Hard coral |
| Bleached Pocillopora | B_Poc | Hard coral |
| Bleached Porites | B_Porit | Hard coral |
| unknown encrusting coral | Enc_cor | Hard coral |
| Fungiidae | Fugiid | Hard coral |
| Gardineroseris | Gardineros | Hard coral |
| Leptastrea | Leptastrea | Hard coral |
| Leptoseris | Leptoseris | Hard coral |
| Montipora | Monti | Hard coral |
| Pavona | Pavona | Hard coral |
| Phymastrea | Phyma | Hard coral |
| Pocillopora | Poc | Hard coral |
| Porites irregularis | Por_irr | Hard coral |
| Porites (massive) | Por_mass | Hard coral |
| Porites rus | Por_rus | Hard coral |
| Psammocora | Psammo | Hard coral |
| Anemone | Anemone | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Snail, unidentified | Sna | Other Invertebrates |
| Soft Coral | Soft_coral | Other Invertebrates |
| Sponge | Sponge | Other Invertebrates |
| Tridacna: Giant clam | Tridacna | Other Invertebrates |
| Echinoderms: sea urchin: regular urchins | Urchin | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Bare Substrate | Bare-Subst | Hard Substrate |
| Cage | Cage | Other |
| Cyanobacteria | Cyano | Other |
| OUT | OUT | Other |
| Actinotrichia fragilis | Act_frag | Algae |
| Amansia rhodantha | Ama_rhod | Algae |
| Amphiroa fragilissima | Amp_frag | Algae |
| Asparagopsis taxiformis | Asp_taxi | Algae |
| bleached cca | B_CCA | Algae |
| Caulerpa peltata | Cau_pelt | Algae |
| Caulerpa pickeringii | Cau_pick | Algae |
| Caulerpa racemosa | Cau_race | Algae |
| Caulerpa serrulata | Cau_ser | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| CCA growing on rubble | CCA_rub | Algae |
| Chaetomorpha antennina | Cha_ant | Algae |
| Dead Acropora with sedimented turf | D_Acr_sed | Algae |
| Dictyosphaeria cavernosa | Dic_cav | Algae |
| Dichotomaria marginata | Dic_mar | Algae |
| Dichotomaria obtusata | Dic_obt | Algae |
| Dictyota | Dic_sp | Algae |
| Dictyosphaeria versluysii | Dic_ver | Algae |
| Dead Pocillopora with sediment free turf | D_Poc | Algae |
| Dead Pocillopora with sedimented turf | D_Poc_sed | Algae |
| Galaxaura spp. | Gal_sp | Algae |
| Gelidiella Acerosa | Gel_ace | Algae |
| Gelidiella spp. | Gel_sp | Algae |
| dead_Halimeda_sp | Hal_dead | Algae |
| Halimeda spp. | Hal_sp | Algae |
| Hydroclathrus clathratus | Hyd_clat | Algae |
| Hypnea spinella | Hyp_spi | Algae |
| Jania spp. | Jan_sp | Algae |
| Lobophora_encrusting | Lobo_enc | Algae |
| Lobophora_foliose | Lobo_fol | Algae |
| Macroalgae | Macro | Algae |
| Padina boryana | Pad_bor | Algae |
| Sargassum pacificum | Sar_pac | Algae |
| Turf with sediment | Sed_turf | Algae |
| Turf with sediment on rubble | Sedturfrub | Algae |
| Spatoglossum sp. | Spato | Algae |
| Turbinaria ornata | Tur_orn | Algae |