| Name | Short Code | Functional Group |
|---|---|---|
| Acanthastrea | Acantha | Hard coral |
| Acropora | Acropora | Hard coral |
| Bleached Hard Coral | B_HC | Hard coral |
| Encrusting coral | Enc_cor | Hard coral |
| Fungiidae | Fugiid | Hard coral |
| Leptastrea | Lepastrea | Hard coral |
| Leptoseris | Leptoseris | Hard coral |
| Lobophyllia | Lobophyl | Hard coral |
| Montipora | Monti | Hard coral |
| Pavona | Pavona | Hard coral |
| Phymastrea | Phyma | Hard coral |
| Pocillopora | Poc | Hard coral |
| Porites | Porites | Hard coral |
| Psammocora | Psammo | Hard coral |
| Millepora | Millepora | Other Invertebrates |
| Other invertebrate | oth_inv | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Dead coral | D_coral | Hard Substrate |
| Turf/Bare space/encrusting algae | TBE_CCA | Hard Substrate |
| Cyanobacteria | Cyano | Other |
| Off | OFF | Other |
| Rubble | Rubble | Other |
| Unidentified | unkn | Other |
| Amansia rhodantha | Amansia | Algae |
| Amphiroa fragilissima | Amp_frag | Algae |
| Asparagopsis taxiformis | Asp_taxi | Algae |
| Caulerpa spp. | caul | Algae |
| Chlorodesmis fastigiata | Chl_fas | Algae |
| Colpomenia sinuosa | Col_sin | Algae |
| Encrusting lobophora on dead coral | DC_lob_enc | Algae |
| Foliose lobophora on dead coral | DC_lob_fol | Algae |
| Dictyota | Dic_sp | Algae |
| Galaxaura spp. | Gal_sp | Algae |
| Gibsmithia hawaiiensis | Gib_haw | Algae |
| Grateloupia filicina | gra | Algae |
| Halimeda spp. | Hal_sp | Algae |
| Hydroclathrus clathratus | Hyd_clat | Algae |
| Hypnea spinella | Hyp_spi | Algae |
| Jania spp. | Jan_sp | Algae |
| Lobophora_encrusting | Lobo_encr | Algae |
| Lobophora_foliose | Lobo_fol | Algae |
| Padina boryana | Pad_bor | Algae |
| Sargassum pacificum | Sar_pac | Algae |
| Spatoglossum sp. | Spato | Algae |
| Turbinaria ornata | Tur_orn | Algae |
| Unknown macroalgae | Unk_mac | Algae |
| Valonia spp. | Valspp | Algae |