| Name | Short Code | Functional Group |
|---|---|---|
| Cyphastrea ocellina | COCE | Hard coral |
| Leptastrea | LEPT | Hard coral |
| Leptoseris incrustans | LINC | Hard coral |
| Lobactis scutaria | LSCU | Hard coral |
| Montipora capitata | MCAP | Hard coral |
| Montipora flabellata | MFLA | Hard coral |
| Montipora incrassata | MINC | Hard coral |
| Montipora patula | MPAT | Hard coral |
| Porites compressa | PCOM | Hard coral |
| Pocillopora damicornis | PDAM | Hard coral |
| Pavona duerdeni | PDUE | Hard coral |
| Porites evermanni | PEVE | Hard coral |
| Pocillopora grandis (eydouxi) | PGRA | Hard coral |
| Porites lobata | PLOB | Hard coral |
| Pocillopora meandrina | PMEA | Hard coral |
| Pocillopora molokensis | PMOL | Hard coral |
| Porites monticulosa | PMON | Hard coral |
| Porites rus | PRUS | Hard coral |
| Psammocora | PSAM | Hard coral |
| Pavona varians | PVAR | Hard coral |
| Sarcothelia edmonsonii | SARC | Hard coral |
| CRED-Unclassified sessile invertebrate | OSIN | Other Invertebrates |
| Sinularia sp. | SINU | Other Invertebrates |
| Porifera | SPON | Other Invertebrates |
| Palythoa | ZOAN | Other Invertebrates |
| Sand | SAND | Soft Substrate |
| Rock | BASA | Hard Substrate |
| TAPE | ATWS | Other |
| Too Dark | BHOL | Other |
| Cyanobacteria | CYAN | Other |
| Mobile fauna | MOFA | Other |
| Unknown | UNKN | Other |
| Peyssonnelia | PEYS | Algae |
| Ramicrusta spp. | RAMI | Algae |
| CCA (crustose coralline algae) | RCCA | Algae |
| Turf algae | TURF | Algae |
| CRED-Brown macroalgae | UNBR | Algae |
| CRED-Encrusting macroalgae | UNEN | Algae |
| Golden Algae | UNGO | Algae |
| CRED-Green macroalgae | UNGR | Algae |
| CRED-Red macroalgae | UNRE | Algae |