| Name | Short Code | Functional Group |
|---|---|---|
| Acropora (branching) | Acr_bra | Hard coral |
| Acropora cytherea | AcrCyth | Hard coral |
| Acropora digitifera | ACRdi | Hard coral |
| Acropora (digitate) | Acr_dig | Hard coral |
| Acropora divaricata | AcrDiv | Hard coral |
| Acropora hyacinthus | AcrHya | Hard coral |
| Acropora | Acropora | Hard coral |
| Acropora (tabulate) | Acr_tab | Hard coral |
| Acropora spp._staghorn | ACSTA | Hard coral |
| Astrea | Astrea | Hard coral |
| Bleached Acropora Digitate | BlAcrDig | Hard coral |
| Bleached Pocillopora meandrina | B_PocMean | Hard coral |
| Porites finger -Dead | CD-PFIN | Hard coral |
| dead Acropora digitifera | DADG | Hard coral |
| Dead Acropora | Dead Acrop | Hard coral |
| Fungia | Fungia | Hard coral |
| Leptastrea purpurea | LPurp | Hard coral |
| Montipora | Monti | Hard coral |
| Montipora capitata | MontiCap | Hard coral |
| Montipora patula | MontiPat | Hard coral |
| Pavona cactus | PavCac | Hard coral |
| Pavona varians | PavVar | Hard coral |
| Pocillopora damicornis | PocDam | Hard coral |
| Pocillopora grandis (eydouxi) | PocGran | Hard coral |
| Pocillopora meandrina | PocMea | Hard coral |
| Pocillopora verrucosa | PocVer | Hard coral |
| Porites Dead | POD | Hard coral |
| Porites compressa | PorComp | Hard coral |
| Porites cylindrica | PorCyl | Hard coral |
| Porites lobata | PorLob | Hard coral |
| Porites lobata bleached | Porlob BL | Hard coral |
| Porites porites | PorPor | Hard coral |
| Porites rus | PorRus | Hard coral |
| sea anenome | aneno | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Porites spp. massive_recently dead | POMA_RD | Hard Substrate |
| Porites porites dead | POPdead | Hard Substrate |
| Porites spp. other, recently dead | POR_RD | Hard Substrate |
| Broken coral rubble | C-Rubble | Other |
| Rubble | Rubble | Other |
| Asparagopsis | Asparago | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Halimeda | Halimeda | Algae |
| Macroalgae | MAL | Algae |
| Porites lobata, recently dead | PLOB_RD | Algae |
| Turf algae | Turf | Algae |
| Turf and sand | Turf_sand | Algae |