| Name | Short Code | Functional Group |
|---|---|---|
| Acropora cervicornis | AcrCerv | Hard coral |
| Acropora palmata | AcrPalm | Hard coral |
| Agaricia spp. | AG | Hard coral |
| Agaricia agaricites | AgAga | Hard coral |
| Agaricia tenuifolia | AgTen | Hard coral |
| Orbicella spp. | CL-ORB | Hard coral |
| Colpophyllia natans | CoNat | Hard coral |
| Dendrogyra cylindrus | DenCyl | Hard coral |
| Diploria labyrinthiformis | DiplLab | Hard coral |
| Montastrea cavernosa | MoCav | Hard coral |
| Orbicella annularis | OrbAnn | Hard coral |
| Porites astreoides | PorAstr | Hard coral |
| Porites divaricata | PorDiv | Hard coral |
| Porites furcata | PorFurc | Hard coral |
| Porites porites | PorPor | Hard coral |
| Pseudodiploria | PSEU | Hard coral |
| Pseudodiploria clivosa | PseuCliv | Hard coral |
| Pseudodiploria strigosa | PseuStrig | Hard coral |
| Siderastrea | Siderastr | Hard coral |
| Siderastrea radians | SidRad | Hard coral |
| Siderastrea siderea | SidSid | Hard coral |
| Live Stony Coral | StonyCoral | Hard coral |
| Gorgonia ventalina | Gven | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Soft Coral | SC | Other Invertebrates |
| Sponge | SP | Other Invertebrates |
| Zoanthid | Zoanthid | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Rock | Rock | Hard Substrate |
| Rubble | Rubble | Other |
| CCA (crustose coralline algae) | CCA | Algae |
| Macroalgae | MAL | Algae |
| Seagrass | Seagrass | Seagrass |