| Name | Short Code | Functional Group |
|---|---|---|
| Acropora cervicornis | AcrCerv | Hard coral |
| Acropora cervicornis - outplanted | AcrCervO | Hard coral |
| Acropora palmata | AcrPalm | Hard coral |
| Acropora palmata - outplanted | AcrPalO | Hard coral |
| Agaricia fragilis | AgFra | Hard coral |
| Agaricia grahamae | AgGra | Hard coral |
| Agaricia humilis | AgHum | Hard coral |
| Agaricia lamarcki | AgLam | Hard coral |
| Acropora palmata - Bleached | APB2 | Hard coral |
| Acropora cervicornis - bleached | BAcropCerv | Hard coral |
| Bleached Hard Coral | B_HC | Hard coral |
| Bleached Orbicella annularis | BL_OrbAnn | Hard coral |
| Bleached Orbicella faveolata | BL_OrbFav | Hard coral |
| Colpophyllia natans | CoNat | Hard coral |
| Dichocoenia stokesi | Dicho_stok | Hard coral |
| Diploria labyrinthiformis | DiplLab | Hard coral |
| Eusmilia fastigiata | EFAS | Hard coral |
| Favia fragum | FaviaFrag | Hard coral |
| Stylaster roseus | Fire Sros | Hard coral |
| Infection_SCTLD | InfSCTLD | Hard coral |
| Isophyllia rigida | IsophRig | Hard coral |
| Isophyllia sinuosa | IsophSin | Hard coral |
| Madracis auretenra | MadAure | Hard coral |
| Madracis decactis | MadDeca | Hard coral |
| Madracis | Madracis | Hard coral |
| Meandrina jacksoni | MEANJ | Hard coral |
| Meandrina meandrites | MM | Hard coral |
| Montastrea cavernosa | MoCav | Hard coral |
| Mussa angulosa | MUSANG | Hard coral |
| Mycetophyllia aliciae | MycetAli | Hard coral |
| Mycetophyllia ferox | MycetFer | Hard coral |
| Mycetophyllia lamarckana | MycetLam | Hard coral |
| Old Dead Coral | OLDC | Hard coral |
| Orbicella annularis | OrbAnn | Hard coral |
| Orbicella annularis - outplanted | OrbAnn_O | Hard coral |
| Orbicella faveolata | OrbFav | Hard coral |
| Orbicella faveolata - outplanted | OrbFav_O | Hard coral |
| Porites astreoides | PorAstr | Hard coral |
| Porites | Porites | Hard coral |
| Pseudodiploria clivosa | PseuCliv | Hard coral |
| Pseudodiploria strigosa | PseuStrig | Hard coral |
| Scolymia | SCOL | Hard coral |
| Siderastrea radians | SidRad | Hard coral |
| Siderastrea siderea | SidSid | Hard coral |
| Stephanocoenia intersepta | StephInt | Hard coral |
| Gorgonian | GOR | Other Invertebrates |
| Millepora alcicornis | MILA | Other Invertebrates |
| Millepora complanata | MILC | Other Invertebrates |
| Sponge | SP | Other Invertebrates |
| Tunicate | Tunicate | Other Invertebrates |
| Zooanthid | Zoo | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Acropora cervicornis dead | ACRC_dead | Hard Substrate |
| Rock | Rock | Hard Substrate |
| Black Band Disease | BBDis | Other |
| Predation | Predation | Other |
| Rubble | Rubble | Other |
| white band disease | WBD | Other |
| White Plague, type II | WPII | Other |
| Yellow band disease | YBD | Other |
| Caulerpa | Caulerpa | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Dictyota | Dictyota | Algae |
| Halimeda | Halimeda | Algae |
| Padina | Padina | Algae |
| Turbinaria (algae) | Turbin | Algae |
| Seagrass | Seagrass | Seagrass |