| Name | Short Code | Functional Group |
|---|---|---|
| Acropora cytherea | AcrCyth | Hard coral |
| Acropora digitifera | ACRdi | Hard coral |
| Acropora humilis | AcrHum | Hard coral |
| Acropora hyacinthus | AcrHya | Hard coral |
| Acropora loripes | AcrLor | Hard coral |
| Acropora | Acropora | Hard coral |
| Anomastraea irregularis | AnIrr | Hard coral |
| Acropora anthocercis | anthocerci | Hard coral |
| Acropora aspera | aspera | Hard coral |
| Isopora brueggemanni | brueggeman | Hard coral |
| Montipora carinata | carinata | Hard coral |
| Cycloseris costulata | Cyccostula | Hard coral |
| Dendrogyra cylindrus | DenCyl | Hard coral |
| Diaseris | Diaser | Hard coral |
| Diploastrea heliopora | DiplHel | Hard coral |
| Diploria labyrinthiformis | DiplLab | Hard coral |
| Diploria strigosa | DIS | Hard coral |
| Leptoseris explanata | explanata | Hard coral |
| Favites russelli | FARU | Hard coral |
| Favites abdita | FavAbd | Hard coral |
| Favites pentagona | FavPent | Hard coral |
| Leptoseris foliosa | foliosa | Hard coral |
| Fungia concinna | Fun_c | Hard coral |
| Fungia fungites | Fung_fung | Hard coral |
| Galaxea fascicularis | GalFasc | Hard coral |
| Acropora granulosa | granulosa | Hard coral |
| Herpolitha limax | Her_lim | Hard coral |
| Acropora hoeksemai | hoeksemai | Hard coral |
| Leptoseris hawaiiensis | LEPH | Hard coral |
| Leptoria irregularis | Lepirregul | Hard coral |
| Lobophyllia | Lobophyl | Hard coral |
| Acropora lutkeni | lutkeni | Hard coral |
| Coeloseris mayeri | mayeri | Hard coral |
| Montipora aequituberculata | MoAeq | Hard coral |
| Montastrea cavernosa | MoCav | Hard coral |
| Montipora efflorescens | Mon_eff | Hard coral |
| Montipora hoffmeisteri | Mon_hof | Hard coral |
| Montipora monasteriata | MONmo | Hard coral |
| Montipora capricornis | Mont caprc | Hard coral |
| Montipora flabellata | MontiFlab | Hard coral |
| Montipora foliosa | Monti fol | Hard coral |
| Acropora multiacuta | multiacuta | Hard coral |
| Mycedium elephantotus | Mycd eleph | Hard coral |
| Leptoseris mycetoseroides | mycetosero | Hard coral |
| Orbicella faveolata | OrbFav | Hard coral |
| Oulophyllia bennettae | Oulbennett | Hard coral |
| Podabacia sinai | P39 | Hard coral |
| Pavona minuta | Pav.m | Hard coral |
| Pavona varians | PavVar | Hard coral |
| Pavona venosa | PavVen | Hard coral |
| Pectinia lactuca | Peclactuca | Hard coral |
| Platygyra daedalea | PlDaed | Hard coral |
| Pocillopora damicornis | PocDam | Hard coral |
| Pocillopora verrucosa | PocVer | Hard coral |
| Porites nodifera | PoNod | Hard coral |
| Porites annae | Por_ann | Hard coral |
| Porites attenuata | Por_att | Hard coral |
| Porites cumulatus | Porcumulat | Hard coral |
| Porites cylindrica | PorCyl | Hard coral |
| Porites divaricata | PorDiv | Hard coral |
| Porites lobata | PorLob | Hard coral |
| Porites lutea | PorLut | Hard coral |
| Porites murrayensis | Pormurraye | Hard coral |
| Porites rus | PorRus | Hard coral |
| Porites solida | Por_sol | Hard coral |
| Acropora robusta | robusta | Hard coral |
| Stylophora pistillata | StPis | Hard coral |
| Symphyllia radians | Symrad | Hard coral |
| Turbinaria mesenterina | TurMes | Hard coral |
| Sinularia | Sinla | Other Invertebrates |
| Ircinia strobilina | SPON-IRCI2 | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Silt/Clay | Silt | Soft Substrate |
| Dead coral | D_coral | Hard Substrate |
| Dead coral with algae | DeadAlg | Other |
| Other | O | Other |
| Rubble | Rubble | Other |
| Transect hardware | Transect | Other |
| Crustose coralline algae | CCA 1 | Algae |
| Chlorophyta | GREE | Algae |
| Halimeda | Halimeda | Algae |
| Halimeda opuntia | HOpu | Algae |
| Turbinaria spp. | TUR | Algae |