| Name | Short Code | Functional Group |
|---|---|---|
| Acanthastrea | Acanth | Hard coral |
| Acropora | Acropora | Hard coral |
| Alveopora | Alveopora | Hard coral |
| Astrea | Astrea | Hard coral |
| Astreopora | Astreo | Hard coral |
| Coeloseris | Coeloseris | Hard coral |
| Coscinaraea | Cosci | Hard coral |
| Ctenactis | Ctena | Hard coral |
| Cycloseris | Cyclo | Hard coral |
| Cyphastrea | Cypha | Hard coral |
| Diploastrea | Diplo | Hard coral |
| Dipsastraea | Dipsa | Hard coral |
| Echinophyllia | Echinophyl | Hard coral |
| Echinopora | Echinopora | Hard coral |
| Echinomorpha nishihirai | Echnishihi | Hard coral |
| Favites | Favites | Hard coral |
| Fungia | Fungia | Hard coral |
| Galaxea | Galaxea | Hard coral |
| Gardineroseris | Gardineros | Hard coral |
| Goniastrea | Goniastrea | Hard coral |
| Goniopora | Goniopora | Hard coral |
| Halomitra | Hal | Hard coral |
| Herpolitha | Herpo | Hard coral |
| Hydnophora | Hydno | Hard coral |
| Isopora | Isopora | Hard coral |
| Leptastrea | Lepta | Hard coral |
| Leptoria | Leptoria | Hard coral |
| Leptoseris | Leptoseris | Hard coral |
| Lobophyllia | Lobophyl | Hard coral |
| Merulina | Merulina | Hard coral |
| Montipora | Monti | Hard coral |
| Mycedium | Myc | Hard coral |
| Other hard coral | OTH-HC | Hard coral |
| Oulophyllia | Ouloph | Hard coral |
| Oxypora | Oxyp | Hard coral |
| Pachyseris | Pachyseris | Hard coral |
| Pavona | Pavona | Hard coral |
| Pectinia | PEC | Hard coral |
| Physogyra | Phys | Hard coral |
| Platygyra | Platy | Hard coral |
| Plerogyra | Plero | Hard coral |
| Pocillopora | Pocill | Hard coral |
| Podabacia | Podbac | Hard coral |
| Porites | Porites | Hard coral |
| Psammocora | Psammo | Hard coral |
| Sandolitha | Sando | Hard coral |
| Seriatopora | Seriatop | Hard coral |
| Stylocoeniella | Styloc | Hard coral |
| Stylophora | Styloph | Hard coral |
| Symphyllia | Symph | Hard coral |
| Tubastrea | Tubastrea | Hard coral |
| Turbinaria (coral) | Turbinaria | Hard coral |
| Anemone | Anemone | Other Invertebrates |
| CRED-Wire and black coral | *ANTI | Other Invertebrates |
| Branching Gorgonian | BrGorg | Other Invertebrates |
| Bryozoan | bryozoan | Other Invertebrates |
| Corallimorpharia | Collimorph | Other Invertebrates |
| Tridacna: Giant clam | GiCl | Other Invertebrates |
| Heliopora | Heliop | Other Invertebrates |
| Hydroid | Hydra | Other Invertebrates |
| Leather Coral | LC | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Other invertebrate | Other Inv | Other Invertebrates |
| Pachyclavularia | Pachcla | Other Invertebrates |
| Sponge | SP | Other Invertebrates |
| Stylaster Sp. | Stylas | Other Invertebrates |
| Tunicate | Tunicate | Other Invertebrates |
| Zoanthid | Zoanthid | Other Invertebrates |
| Mud | Mud | Soft Substrate |
| Sand | Sand | Soft Substrate |
| Basalt | Basalt | Hard Substrate |
| Limestone free of overgrowth | LIME | Hard Substrate |
| Cyanobacteria | CYANOB | Other |
| Unknown | Unk | Other |
| Other Algae | ALG_OTH | Algae |
| Brown fleshy algae | BrFlesAlg | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Chrysophyta | CHRY | Algae |
| Green fleshy algae | GFA | Algae |
| Macroalgae: Articulated calcareous: red | MAACR | Algae |
| Macroalgae: Encrusting: brown | MAENB | Algae |
| Macroalgae: Encrusting: green | MAENG | Algae |
| Macroalgae: Encrusting: red | MAENR | Algae |
| Macroalgea: Green Calcified | MAGRC | Algae |
| Macroalgae:Encrusting:Red:Calcareous:Crustose | MERCC | Algae |
| Padina | Padina | Algae |
| Red fleshy algae | RFA | Algae |
| Turf algae | Turf | Algae |