| Name | Short Code | Functional Group |
|---|---|---|
| Acanthastrea | Acanth | Hard coral |
| Acropora (branching) | Acr_bra | Hard coral |
| Acropora (corymbose) | Acr_corym | Hard coral |
| Acropora (digitate) | Acr_dig | Hard coral |
| Acropora | Acropora | Hard coral |
| Acropora (tabulate) | Acr_tab | Hard coral |
| Astrea | Astrea | Hard coral |
| Astreopora | Astreo | Hard coral |
| Coscinaraea | Cosci | Hard coral |
| Cyphastrea | Cypha | Hard coral |
| Dipsastraea | Dipsa | Hard coral |
| Echinopora | Echinopora | Hard coral |
| Favites | Favites | Hard coral |
| Fungia | Fungia | Hard coral |
| Galaxea | Galaxea | Hard coral |
| Gardineroseris | Gardineros | Hard coral |
| Goniastrea | Goniastrea | Hard coral |
| Halomitra | Hal | Hard coral |
| Hydnophora | Hydno | Hard coral |
| Isopora | Isopora | Hard coral |
| Leptastrea | Lepta | Hard coral |
| Leptoria | Leptoria | Hard coral |
| Leptoseris | Leptoseris | Hard coral |
| Lobophyllia | Lobophyl | Hard coral |
| Montipora | Monti | Hard coral |
| Other hard coral | OTH-HC | Hard coral |
| Pachyseris | Pachyseris | Hard coral |
| Pavona encrusting | Pav-encr | Hard coral |
| Pavona | Pavona | Hard coral |
| Platygyra | Platy | Hard coral |
| Pocillopora | Pocill | Hard coral |
| Porites (branching) | Por_branch | Hard coral |
| Porites | Porites | Hard coral |
| Porites (massive) | Por_mass | Hard coral |
| Porites rus | PorRus | Hard coral |
| Psammocora | Psammo | Hard coral |
| Porites superfusa | P-SUPER | Hard coral |
| Sandolitha | Sando | Hard coral |
| Stylophora | Styloph | Hard coral |
| Symphyllia | Symph | Hard coral |
| Turbinaria (coral) | Turbinaria | Hard coral |
| Bryozoan | bryozoan | Other Invertebrates |
| Corallimorpharia | Collimorph | Other Invertebrates |
| Tridacna: Giant clam | GiCl | Other Invertebrates |
| Heliopora | Heliop | Other Invertebrates |
| Hydroid | Hydra | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Other invertebrate | Other Inv | Other Invertebrates |
| Sarcophyton | Sarco | Other Invertebrates |
| Soft Coral | SC | Other Invertebrates |
| Sinularia | Sinla | Other Invertebrates |
| Sponge | SP | Other Invertebrates |
| Tunicate | Tunicate | Other Invertebrates |
| Zoanthid | Zoanthid | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Black Fungus Disease (BFD) | BFD | Other |
| Cyanobacteria | CYANOB | Other |
| Turf algal sediment matrix | TAS | Other |
| Unknown | Unk | Other |
| Other Algae | ALG_OTH | Algae |
| Asparagopsis | Asparago | Algae |
| Avrainvillea | Avrainvil | Algae |
| Caulerpa | Caulerpa | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Chlorodesmis sp. | Chlor | Algae |
| Cladophora sp. | Cldph | Algae |
| Dictyosphaeria | Dictyosph | Algae |
| Galaxaura | Galaxaura | Algae |
| Halimeda | Halimeda | Algae |
| Hypnea | Hyp | Algae |
| Lobophora | Lobophora | Algae |
| Macroalgae: Encrusting: brown | MAENB | Algae |
| Neomeris | Neomeris | Algae |
| Padina | Padina | Algae |
| Peyssonnelia | Peysson | Algae |
| Red fleshy algae | RFA | Algae |
| Sick CCA | SCCA | Algae |
| Turf algae | Turf | Algae |
| Turf and sand | Turf_sand | Algae |
| Tydemania spp. | Tyd | Algae |
| Valonia spp. | Valspp | Algae |