| Name | Short Code | Functional Group |
|---|---|---|
| Alveopora | ALVEn | Hard coral |
| Anacropora | ANACn | Hard coral |
| Astreopora | ASTRn | Hard coral |
| Bleached Astreopora | bASTRn | Hard coral |
| Bleached Acropora branching | bCBAn | Hard coral |
| Bleached Reef Star Acropora (branching) | bCBArs | Hard coral |
| Bleached Acropora Digitate | bCDAn | Hard coral |
| Bleached Reef Star Digitate Acropora | bCDArs | Hard coral |
| Bleached Encrusting | bCEn | Hard coral |
| Thin, Foliose, and Plating bleached | bCFn | Hard coral |
| Bleached massive | bCMn | Hard coral |
| Bleached Acropora tabulate | bCTAn | Hard coral |
| Bleached Reef Star Acropora (tabulate) | bCTArs | Hard coral |
| Bleached Cyphastrea | bCYPHn | Hard coral |
| Bleached Diploastrea | bDIPLn | Hard coral |
| Bleached Echinopora | bECHIn | Hard coral |
| Bleached Fungia | bFUNGn | Hard coral |
| Bleached Favia sp. | bFVIAn | Hard coral |
| Bleached Favites | bFVTSn | Hard coral |
| Bleached Galaxea | bGALXn | Hard coral |
| Bleached Goniopora | bGONPn | Hard coral |
| Bleached Goniastrea | bGONSn | Hard coral |
| Bleached Herpolitha | bHERPn | Hard coral |
| Bleached Hydnophora | bHYDNn | Hard coral |
| Bleached Isopora | bISOPn | Hard coral |
| Bleached Lobophyllia sp. | bLOBOn | Hard coral |
| Bleached Leptastrea | bLPTAn | Hard coral |
| Bleached Leptoria | bLPTOn | Hard coral |
| Bleached Merulina | bMERUn | Hard coral |
| Bleached Montipora | bMONPn | Hard coral |
| Bleached Mycedium | bMYCEn | Hard coral |
| Bleached Oxypora | bOXYPn | Hard coral |
| Bleached Pachyseris | bPACHn | Hard coral |
| Bleached Pavona | bPAVOn | Hard coral |
| Bleached Pectinia | bPECTn | Hard coral |
| Bleached Platygyra | bPLATn | Hard coral |
| Bleached Pocillopora | bPOCIn | Hard coral |
| Bleached Porites | bPORIn | Hard coral |
| Bleached Psammocora | bPSAMn | Hard coral |
| Bleached Seriatopora | bSERIn | Hard coral |
| Caulastrea | CAULn | Hard coral |
| Acropora (branching) | CBAn | Hard coral |
| Reef Star Acropora (branching) | CBArs | Hard coral |
| Non-Acropora branching | CBNAn | Hard coral |
| Reef Star Non-Acropora (branching) | CBNArs | Hard coral |
| Acropora (digitate) | CDAn | Hard coral |
| Reef Star Acropora (digitate) | CDArs | Hard coral |
| Non-Acropora (Digitate) | CDNAn | Hard coral |
| Hard Coral (encrusting) | CEn | Hard coral |
| Reef Star Encrusting | CErs | Hard coral |
| Hard Coral (foliose) | CFn | Hard coral |
| Reef Star Foliose | CFrs | Hard coral |
| Hard Coral (laminar) | CLn | Hard coral |
| Hard Coral (massive) | CMn | Hard coral |
| Coeloseris | COELn | Hard coral |
| Coscinaraea | COSCn | Hard coral |
| Hard Coral (submassive) | CSn | Hard coral |
| Reef Star submassive | CSrs | Hard coral |
| Acropora (tabulate) | CTAn | Hard coral |
| Reef Star Acropora (tabulate) | CTArs | Hard coral |
| Ctenactis | CTENn | Hard coral |
| Cyphastrea | CYPHn | Hard coral |
| Dead Acropora (branching) | dCBAn | Hard coral |
| Reef Star Dead Acropora (branching) | dCBArs | Hard coral |
| Dead Non-Acropora (branching) | dCBNAn | Hard coral |
| Reef Star Dead Non-Acropora (branching) | dCBNArs | Hard coral |
| Dead Acropora (digitate) | dCDAn | Hard coral |
| Dead Encrusting | dCEn | Hard coral |
| Recently Dead Foliose Coral | dCFn | Hard coral |
| Dead Massive Coral | dCMn | Hard coral |
| Dead Submassive Coral | dCSn | Hard coral |
| Dead Acropora (Tabulate) | dCTAn | Hard coral |
| Reef Star Dead Acropora (tabulate) | dCTArs | Hard coral |
| Diploastrea | DIPLn | Hard coral |
| Echinopora | ECHIn | Hard coral |
| Euphyllia | EUPHn | Hard coral |
| Fungia | FUNGn | Hard coral |
| Favia | FVIAn | Hard coral |
| Favites | FVTSn | Hard coral |
| Galaxea | GALXn | Hard coral |
| Goniopora | GONPn | Hard coral |
| Goniastrea | GONSn | Hard coral |
| Halomitra | HALOn | Hard coral |
| Herpolitha | HERPn | Hard coral |
| Hydnophora | HYDNn | Hard coral |
| Isopora | ISOPn | Hard coral |
| Lithophyllon | LITHn | Hard coral |
| Lobophyllia | LOBOn | Hard coral |
| Leptastrea | LPTAn | Hard coral |
| Leptoria | LPTOn | Hard coral |
| Merulina | MERUn | Hard coral |
| Montipora | MONPn | Hard coral |
| Montastraea | MONSn | Hard coral |
| Mycedium | MYCEn | Hard coral |
| Oulophyllia | OULOn | Hard coral |
| Oxypora | OXYPn | Hard coral |
| Pachyseris | PACHn | Hard coral |
| Pavona | PAVOn | Hard coral |
| Pectinia | PECTn | Hard coral |
| Platygyra | PLATn | Hard coral |
| Pocillopora | POCIn | Hard coral |
| Reef Star Pocillopora | POCIrs | Hard coral |
| POLYPHYLLIA | POLYn | Hard coral |
| Porites | PORIn | Hard coral |
| Reef Star Porites | PORIrs | Hard coral |
| Psammocora | PSAMn | Hard coral |
| Seriatopora | SERIn | Hard coral |
| Reef Star Seriatopora | SERIrs | Hard coral |
| Sandalolitha | SNDLn | Hard coral |
| Stylophora | STYLn | Hard coral |
| Reef Star Stylophora | STYLrs | Hard coral |
| Symphyllia | SYMPn | Hard coral |
| Other invertebrate | IN | Other Invertebrates |
| Soft Coral | SCn | Other Invertebrates |
| Sponge | SPn | Other Invertebrates |
| Sand | SA | Soft Substrate |
| Rock | RO | Hard Substrate |
| Reef Star | RS | Other |
| Rubble | RU | Other |
| TAPE | TAPE | Other |
| Unknown | U | Other |
| Macroalgae | AMn | Algae |
| Turf algae | ATn | Algae |
| Reef Star Turf algae | ATrs | Algae |