| Name | Short Code | Functional Group |
|---|---|---|
| Agaricia agaricites | AAGA | Hard coral |
| Acropora cervicornis | ACER | Hard coral |
| Agaricia lamarcki | ALAM | Hard coral |
| Acropora palmata | APAL | Hard coral |
| Agaricia tenuifolia | ATEN | Hard coral |
| Bleached Hard Coral | BHC | Hard coral |
| Colpophyllia natans | CNAT | Hard coral |
| Dendrogyra cylindrus | DCYL | Hard coral |
| Diploria labyrinthiformis | DLAB | Hard coral |
| Dichocoenia stokesi | DSTO | Hard coral |
| Eusmilia fastigiata | EFAS | Hard coral |
| Madracis auretenra | MAUR | Hard coral |
| Montastraea cavernosa | MCAV | Hard coral |
| Madracis decactis | MDEC | Hard coral |
| Meandrina meandrites | MMEA | Hard coral |
| Orbicella annularis | OANN | Hard coral |
| Orbicella faveolata | OFAV | Hard coral |
| Orbicella franksi | OFRA | Hard coral |
| Porites astreoides | PAST | Hard coral |
| Pseudodiploria clivosa | PCLI | Hard coral |
| Porites porites | PPOR | Hard coral |
| Pseudodiploria strigosa | PSTR | Hard coral |
| Siderastrea radians | SRAD | Hard coral |
| Siderastrea siderea | SSID | Hard coral |
| Millepora complanata | MCOM | Other Invertebrates |
| Sponge | SP | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Dead coral | D_coral | Hard Substrate |
| Algae | Algae | Algae |