| Name | Short Code | Functional Group |
|---|---|---|
| Cyphastrea ocellina | COCE | Hard coral |
| Lobactis scutaria | FSCU | Hard coral |
| Leptastrea bewickensis | LBEW | Hard coral |
| Leptoseris incrustans | LINC | Hard coral |
| Leptastrea purpurea | LPUR | Hard coral |
| Montipora capitata | MCAP | Hard coral |
| Montipora flabellata | MFLA | Hard coral |
| Montipora patula | MPAT | Hard coral |
| Porites compressa | PCOM | Hard coral |
| Pocillopora damicornis | PDAM | Hard coral |
| Pavona duerdeni | PDUE | Hard coral |
| Porites evermanni | PEVE | Hard coral |
| Pocillopora grandis (eydouxi) | PGRA | Hard coral |
| Porites lobata | PLOB | Hard coral |
| Porites lutea | PLUT | Hard coral |
| Pocillopora meandrina | PMEA | Hard coral |
| Porites monticulosa | PMON | Hard coral |
| Porites rus | PRUS | Hard coral |
| Pavona varians | PVAR | Hard coral |
| Sarcothelia edmonsonii | Sedmon | Hard coral |
| Palythoa | PALY | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Rock | Rock | Hard Substrate |
| Cyanobacteria | CYAN | Other |
| Too Dark | Dark | Other |
| Mobile fauna | Mobile | Other |
| Broken coral rubble | Rubble | Other |
| TAPE | Tape | Other |
| Unknown | Unk | Other |
| CRED-Brown macroalgae | BMAC | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| CRED-Green macroalgae | GMAC | Algae |
| Halimeda discoidea | HADI | Algae |
| Padina spp. | Pad_spp | Algae |
| CRED-Red macroalgae | RMAC | Algae |
| Turf algae | Turf | Algae |