| Name | Short Code | Functional Group |
|---|---|---|
| Acropora cervicornis | AcrCerv | Hard coral |
| Acropora cervicornis - outplanted | AcrCervO | Hard coral |
| Acropora palmata | AcrPalm | Hard coral |
| Acropora palmata - outplanted | AcrPalO | Hard coral |
| Agaricia agaricites | AgAga | Hard coral |
| Diploria labyrinthiformis | DiplLab | Hard coral |
| Montastrea cavernosa | MoCav | Hard coral |
| Montastraea cavernosa - outplanted | MontCav_O | Hard coral |
| Orbicella annularis | OrbAnn | Hard coral |
| Orbicella annularis - outplanted | OrbAnn_O | Hard coral |
| Orbicella faveolata | OrbFav | Hard coral |
| Orbicella faveolata - outplanted | OrbFav_O | Hard coral |
| Porites astreoides | PorAstr | Hard coral |
| Porites furcata | PorFurc | Hard coral |
| Porites porites | PorPor | Hard coral |
| Porites porties - outplanted | PorPor_O | Hard coral |
| Pseudodiploria clivosa - Outplanted | PseCli_O | Hard coral |
| Pseudodiploria strigosa - outplanted | PseStr_O | Hard coral |
| Pseudodiploria clivosa | PseuCliv | Hard coral |
| Pseudodiploria strigosa | PseuStrig | Hard coral |
| Siderastrea | Siderastr | Hard coral |
| Stephanocoenia intersepta | StephInt | Hard coral |
| Gorgonian | GOR | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Other biota | OtherB | Other Invertebrates |
| Palythoa | PALYTHO | Other Invertebrates |
| Porifera | Prfa | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Bare Substrate | Bare-Subst | Hard Substrate |
| Dead coral | D_coral | Hard Substrate |
| Hard Bottom | Hrd | Hard Substrate |
| Cyanobacteria | CYANOB | Other |
| Other | O | Other |
| Rubble | Rubble | Other |
| Unknown | Unk | Other |
| Amphiroa sp. | Amphi | Algae |
| Dictyota | Dictyota | Algae |
| Halimeda | Halimeda | Algae |
| Macroalgae | MAL | Algae |
| Peyssonnelia | Peysson | Algae |
| Ramicrusta spp. | Ram_spp | Algae |
| Reef Cement | ReefCem | Algae |
| Turbinaria (algae) | Turbin | Algae |
| Turf growing on hard substrate | TURFH | Algae |