| Name | Short Code | Functional Group |
|---|---|---|
| Acanthastrea | Acan | Hard coral |
| Acropora (arborescent) | AcArb | Hard coral |
| Acropora (corymbose) | AcCor | Hard coral |
| Acropora (digitate) | AcDig | Hard coral |
| Acropora (encrusting) | AcEnc | Hard coral |
| Acropora (hispidose) | AcHisp | Hard coral |
| Acropora (plating) | AcPlat | Hard coral |
| Acropora subgenus Isopora | Acr_Iso | Hard coral |
| Acropora (branching) | Acro-Br | Hard coral |
| Acropora (tabulate) | AcroTab | Hard coral |
| Agaricia spp. | AG | Hard coral |
| Alveopora | Alve | Hard coral |
| Astreopora | Astreo | Hard coral |
| Bleached Pocillopora | Blpocill | Hard coral |
| Porites (branching) | BRA_SMO_Po | Hard coral |
| Caulastrea | Caula | Hard coral |
| Coscinaraea | COSC | Hard coral |
| Ctenactis | Cten | Hard coral |
| Cyphastrea | Cypha | Hard coral |
| Diploastrea | Dipl | Hard coral |
| Echinopora | Ech | Hard coral |
| Echinophyllia | ECHIN | Hard coral |
| Encrusting Hard Coral | ENHr | Hard coral |
| Encrusting Montipora | ENmont | Hard coral |
| Favites | Fav | Hard coral |
| Favia (Indo-Pacific) | Favia | Hard coral |
| Fungia | Fung | Hard coral |
| Galaxea | GAL | Hard coral |
| Gardineroseris | Gardin | Hard coral |
| Goniastrea | Gon | Hard coral |
| Goniopora | Gonio | Hard coral |
| Halomitra | Hal | Hard coral |
| Herpolitha | Herpo | Hard coral |
| Hydnophora | HYDNO | Hard coral |
| Leptoria | Lept | Hard coral |
| Leptastrea | Lepta | Hard coral |
| Leptoseris | Lepto | Hard coral |
| Lobophyllia | Lobo | Hard coral |
| Merulina | MER | Hard coral |
| Montastraea | Monta | Hard coral |
| Montipora | Monti | Hard coral |
| Montipora Laminar with Ridges | MontLamR | Hard coral |
| Mycedium | Myc | Hard coral |
| Oxypora | Oxyp | Hard coral |
| Pachyseris | Pachy | Hard coral |
| Pavona | Pavon | Hard coral |
| Porites cylindrica | Pcyl | Hard coral |
| Platygyra | Plat | Hard coral |
| Plesiastrea | Ples | Hard coral |
| Pocillopora | Pocill | Hard coral |
| Porites (massive) | Por_mas | Hard coral |
| Porites PLating | POR-PLA | Hard coral |
| Porites rus | P. rus | Hard coral |
| Psammocora | Psam | Hard coral |
| Seriatopora | SER | Hard coral |
| Stylophora | STY | Hard coral |
| Symphyllia | Symp | Hard coral |
| Turbinaria (coral) | TURB | Hard coral |
| Ascidian | A | Other Invertebrates |
| Sea anemone | ANEM | Other Invertebrates |
| CRED-Corallimorph | *CMOR | Other Invertebrates |
| Encrusting sponge | ENSP | Other Invertebrates |
| Echinoderms: sea urchin | EUR | Other Invertebrates |
| Tridacna: Giant clam | GiCl | Other Invertebrates |
| Holothuria | Holo | Other Invertebrates |
| Lobophytum | Lobphy | Other Invertebrates |
| Millepora | Mille | Other Invertebrates |
| Rumphella sp. | Rum | Other Invertebrates |
| Sarcophyton | Sarco | Other Invertebrates |
| Sponges: Erect forms: Laminar | SEL | Other Invertebrates |
| Sponges: Erect forms: Simple | SES | Other Invertebrates |
| Sponges: Hollow forms | SH | Other Invertebrates |
| Sinularia | Sinla | Other Invertebrates |
| Sponge (massive) | SpMass | Other Invertebrates |
| Sponge | Sponge | Other Invertebrates |
| Xenia | Xeni | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Rubble | SOFT_RUBB | Other |
| Unclear | Unc | Other |
| Crustose coralline algae | CCA 1 | Algae |
| Macroalgae: Articulated calcareous | MAAC | Algae |
| Turf on Sand | TrfOnSnd | Algae |
| Turf algae | Turf | Algae |