| Name | Short Code | Functional Group |
|---|---|---|
| Acropora cervicornis | AcrCerv | Hard coral |
| Acropora palmata | AcrPalm | Hard coral |
| Agaricia spp. | AG | Hard coral |
| Agaricia tenuifolia | AgTen | Hard coral |
| Colpophyllia natans | CoNat | Hard coral |
| Dendrogyra cylindrus | DenCyl | Hard coral |
| Diploria labyrinthiformis | DiplLab | Hard coral |
| Diploria stigosa | DS | Hard coral |
| Live Coral | LICO | Hard coral |
| Madracis auretenra | MadAure | Hard coral |
| Madracis decactis | MadDeca | Hard coral |
| Madracis | Madracis | Hard coral |
| Montastrea franksi | MFRA | Hard coral |
| Millepora spp. | Mil_spp | Hard coral |
| Meandrina meandrites | MM | Hard coral |
| Montastrea annularis | Moann | Hard coral |
| Montastrea spp. | Mont_spp | Hard coral |
| Palythoa sp | Paly | Hard coral |
| Porites astreoides | PorAstr | Hard coral |
| Porites divaricata | PorDiv | Hard coral |
| Porites furcata | PorFurc | Hard coral |
| Porites | Porites | Hard coral |
| Porites porites | PorPor | Hard coral |
| Pseudodiploria strigosa | PseuStrig | Hard coral |
| Recent Dead Coral | RD_HC | Hard coral |
| Siderastrea | Siderastr | Hard coral |
| Stephanocoenia intersepta | StephInt | Hard coral |
| Eunicea spp. | EUNSPP | Other Invertebrates |
| Gorgonia spp. | GORSPP | Other Invertebrates |
| Millepora alcicornis | MILA | Other Invertebrates |
| Millepora complanata | MILC | Other Invertebrates |
| Millepora dead | MILDEAD | Other Invertebrates |
| Millepora_encrusting | milenc | Other Invertebrates |
| Muricea spp. | MURSPP | Other Invertebrates |
| 51_fan_shape_octocoral | OCFA | Other Invertebrates |
| Thin Soft Octocoral | OctoThnSft | Other Invertebrates |
| Other invertebrate | Other Inv | Other Invertebrates |
| Plexaura spp. | PLESPP | Other Invertebrates |
| Plexaurella spp. | PLEXSPP | Other Invertebrates |
| Pseudoterogorgia bipinnata | Psebip | Other Invertebrates |
| Pseudoplexaura spp. | PSESPP | Other Invertebrates |
| Pseudopterogorgia | Pseudopter | Other Invertebrates |
| Rope sponge | ROSP | Other Invertebrates |
| Sponge: Cliona | SINV_SPO_C | Other Invertebrates |
| Sponges: Vase | SINV_SPO_V | Other Invertebrates |
| Sponge | SP | Other Invertebrates |
| Sponge: Encrusting | SpongeCRUS | Other Invertebrates |
| Tube or Rod Sponge | SPTU | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Dead coral | D_coral | Hard Substrate |
| Pavement | Pavement | Hard Substrate |
| Sand / Rubble | SaRub | Other |
| Unknown | Unk | Other |
| Algae, encrusting unidentified | ALEN | Algae |
| Brown Macroalgae | BrownM | Algae |
| Brown algae, unidentified | BRUN | Algae |
| Dictyota | Dictyota | Algae |
| Green algae, unidentified | GRAL | Algae |
| Green Macroalgae | GreenM | Algae |
| Lobophora | Lobophora | Algae |
| Filamentous Macroalgae | MACR_Fil_A | Algae |
| Macroalgae | MAL | Algae |
| Turf Algae (macroalgae) | MAL_turf | Algae |
| Red algae, unidentified encrusting | RAUE | Algae |
| Turf on dead massive coral | TMAS | Algae |
| Turf and sand | Turf_sand | Algae |
| Unknown macroalgae | UnkMacroa | Algae |
| Thalassia hemprichii | ThalHemp | Seagrass |
| Thalassia testudinum | ThalTes | Seagrass |