| Name | Short Code | Functional Group |
|---|---|---|
| Agaricia agaricites | AAGA | Hard coral |
| Acropora cervicornis | ACER | Hard coral |
| Agaricia fragilis | AFRA | Hard coral |
| Agaricia | AGARICIA | Hard coral |
| Agaricia grahamae | AGRA | Hard coral |
| Agaricia humilis | AHUM | Hard coral |
| Agaricia lamarcki | ALAM | Hard coral |
| Acropora palmata | APAL | Hard coral |
| Acropora prolifera | APRO | Hard coral |
| Agaricia tenuifolia | ATEN | Hard coral |
| Cladocora arbuscula | CARB | Hard coral |
| Bleached Hard Coral | CDURO BL | Hard coral |
| Recent Dead Coral | CduroRMuer | Hard coral |
| Colpophyllia natans | CNAT | Hard coral |
| Dendrogyra cylindrus | DCYL | Hard coral |
| Diploria labyrinthiformis | DLAB | Hard coral |
| Dichocoenia stokesi | DSTO | Hard coral |
| Eusmilia fastigiata | EFAS | Hard coral |
| Favia fragum | FFRA | Hard coral |
| Helioseris cucullata | HCUC | Hard coral |
| Isophyllia rigida | IRIG | Hard coral |
| Isophyllia sinuosa | ISIN | Hard coral |
| Isophyllia | ISOPHYLLIA | Hard coral |
| Manicina areolata | MARE | Hard coral |
| Madracis auretenra | MAUR | Hard coral |
| Montastraea cavernosa | MCAV | Hard coral |
| Madracis decactis | MDEC | Hard coral |
| Madracis formosa | MFOR | Hard coral |
| Meandrina meandrites | MMEA | Hard coral |
| Madracis pharensis | MPHA | Hard coral |
| Mycetophyllia | MYCETO | Hard coral |
| Orbicella annularis | OANN | Hard coral |
| Orbicella faveolata | OFAV | Hard coral |
| Orbicella franksi | OFRA | Hard coral |
| Orbicella | ORBICELLA | Hard coral |
| Porites astreoides | PAST | Hard coral |
| Pseudodiploria clivosa | PCLI | Hard coral |
| Porites divaricata | PDIV | Hard coral |
| Porites furcata | PFUR | Hard coral |
| Porites | PORITES | Hard coral |
| Porites porites | PPOR | Hard coral |
| Pseudodiploria strigosa | PSTR | Hard coral |
| Solenastrea bournoni | SBOU | Hard coral |
| Solenastrea hyades | SHYA | Hard coral |
| Siderastrea | SIDERASTRE | Hard coral |
| Stephanocoenia intersepta | SINT | Hard coral |
| Solenastrea | SOLENASTRE | Hard coral |
| Siderastrea radians | SRAD | Hard coral |
| Siderastrea siderea | SSID | Hard coral |
| Tubastraea coccinea | TCOC | Hard coral |
| Soft Coral | CoralBland | Other Invertebrates |
| Erect sponge | EspErecta | Other Invertebrates |
| Encrusting sponge | EspIncrust | Other Invertebrates |
| Millepora alcicornis | MALC | Other Invertebrates |
| Millepora complanata | MCOM | Other Invertebrates |
| Millepora squarrosa | MSQU | Other Invertebrates |
| Millepora striata | MSTR | Other Invertebrates |
| Other Invertebrates | Otr_Invert | Other Invertebrates |
| Other sessile invertebrates | Otr_InvSec | Other Invertebrates |
| Sand | Arena | Soft Substrate |
| Trash | Basura | Other |
| Cyanobacteria | CYANOB | Other |
| Unknown | Desconocid | Other |
| Rubble | Escombros | Other |
| All other | Otros | Other |
| Shadow | Sombra | Other |
| Transect hardware | Transecto | Other |
| Brown Macroalgae | BrownM | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| CCA_Dead | CCADEAD | Algae |
| Dictyota | Dictyota | Algae |
| Galaxaura | Galaxaura | Algae |
| Green Macroalgae | GreenM | Algae |
| Halimeda | Halimeda | Algae |
| Lobophora | Lobophora | Algae |
| Macroalgae | Macroalga | Algae |
| Padina | Padina | Algae |
| Red Macroalgae | RedM | Algae |
| Turf algae | Turf | Algae |
| Turf and sand | Turf_sand | Algae |
| Seagrass | Pasto | Seagrass |