| Name | Short Code | Functional Group |
|---|---|---|
| Agaricia agaricites | AAGA | Hard coral |
| Bleached Agaricia agaricites | AAGA_BL | Hard coral |
| Acropora cervicornis | ACER | Hard coral |
| Bleached Acropora cervicornis | ACER_BL | Hard coral |
| Acropora | ACRO | Hard coral |
| Bleached Acropora | ACRO_BL | Hard coral |
| Agaricia fragilis | AFRA | Hard coral |
| Bleached Agaricia fragilis | AFRA_BL | Hard coral |
| Agaricia | AGAR | Hard coral |
| Bleached Agaricia | AGAR_BL | Hard coral |
| Agaricia grahamae | AGRA | Hard coral |
| Bleached Agaricia grahamae | AGRA_BL | Hard coral |
| Agaricia humilis | AHUM | Hard coral |
| Bleached Agaricia humilis | AHUM_BL | Hard coral |
| Agaricia lamarcki | ALAM | Hard coral |
| Bleached Agaricia lamarcki | ALAM_BL | Hard coral |
| Acropora palmata | APAL | Hard coral |
| Bleached Acropora palmata | APAL_BL | Hard coral |
| Acropora prolifera | APRO | Hard coral |
| Bleached Acropora prolifera | APRO_BL | Hard coral |
| Agaricia tenuifolia | ATEN | Hard coral |
| Bleached Agaricia tenuifolia | ATEN_BL | Hard coral |
| Colpophyllia natans | CNAT | Hard coral |
| Bleached Colpophyllia natans | CNAT_BL | Hard coral |
| Dendrogyra cylindrus | DCYL | Hard coral |
| Bleached Dendrogyra cylindrus | DCYL_BL | Hard coral |
| Diploria labyrinthiformis | DLAB | Hard coral |
| Bleached Diploria labyrinthiformes | DLAB_BL | Hard coral |
| Dichocoenia stokesi | DSTO | Hard coral |
| Bleached Dichocoenia stokesi | DSTO_BL | Hard coral |
| Eusmilia fastigiata | EFAS | Hard coral |
| Bleached Eusmilia fastigiata | EFAS_BL | Hard coral |
| Favia fragum | FFRA | Hard coral |
| Bleached Favia fragum | FFRA_BL | Hard coral |
| Helioseris cucullata | HCUC | Hard coral |
| Bleached Helioseris cucullata | HCUC_BL | Hard coral |
| Isophyllia rigida | IRIG | Hard coral |
| Bleached Isophyllia rigida | IRIG_BL | Hard coral |
| Isophyllia sinuosa | ISIN | Hard coral |
| Bleached Isophyllia sinuosa | ISIN_BL | Hard coral |
| Bleached Millepora alcicornis | MALC_BL | Hard coral |
| Mycetophyllia aliciae | MALI | Hard coral |
| Bleached Mycetophyllia aliciae | MALI_BL | Hard coral |
| Mussa angulosa | MANG | Hard coral |
| Bleached Mussa angulosa | MANG_BL | Hard coral |
| Manicina areolata | MARE | Hard coral |
| Bleached Manicina areolata | MARE_BL | Hard coral |
| Madracis auretenra | MAUR | Hard coral |
| Bleached Madracis auretenra | MAUR_BL | Hard coral |
| Montastraea cavernosa | MCAV | Hard coral |
| Bleached Montastrea cavernosa | MCAV_BL | Hard coral |
| Mycetophyllia danaana | MDAN | Hard coral |
| Bleached Mycetophyllia danaana | MDAN_BL | Hard coral |
| Madracis decacitis | MDEC | Hard coral |
| Bleached Madracis decactis | MDEC_BL | Hard coral |
| Mycetophyllia ferox | MFER | Hard coral |
| Bleached Mycetophyllia ferox | MFER_BL | Hard coral |
| Mycetophyllia lamarckana | MLAM | Hard coral |
| Bleached Mycetophyllia lamarckiana | MLAM_BL | Hard coral |
| Meandrina meandrites | MMEA | Hard coral |
| Bleached Meandrina meandrites | MMEA_BL | Hard coral |
| Madracis senaria | MSEN | Hard coral |
| Bleached Madracis senaria | MSEN_BL | Hard coral |
| Mycetophyllia | MYCE | Hard coral |
| Bleached Mycetophyllia | MYCE_BL | Hard coral |
| Orbicella annularis | OANN | Hard coral |
| Bleached Orbicella annularis | OANN_BL | Hard coral |
| Oculina diffusa | ODIF | Hard coral |
| Bleached Oculina diffusa | ODIF_BL | Hard coral |
| Orbicella faveolata | OFAV | Hard coral |
| Bleached Orbicella faveolata | OFAV_BL | Hard coral |
| Orbicella franksi | OFRA | Hard coral |
| Bleached Orbicella franksi | OFRA_BL | Hard coral |
| Orbicella | ORBI | Hard coral |
| Bleached Orbicella | ORBI_BL | Hard coral |
| Porites astreoides | PAST | Hard coral |
| Bleached Porites astreoides | PAST_BL | Hard coral |
| Pseudodiploria clivosa | PCLI | Hard coral |
| Bleached Pseudodiploria clivosa | PCLI_BL | Hard coral |
| Porites divaricata | PDIV | Hard coral |
| Bleached Porites divaricata | PDIV_BL | Hard coral |
| Porites furcata | PFUR | Hard coral |
| Bleached Porites furcata | PFUR_BL | Hard coral |
| Porites | PORI | Hard coral |
| Bleached Porites | PORI_BL | Hard coral |
| Porites porites | PPOR | Hard coral |
| Bleached Porites porites | PPOR_BL | Hard coral |
| Pseudodiploria | PSEU | Hard coral |
| Bleached Pseudodiploria | PSEU_BL | Hard coral |
| Pseudodiploria strigosa | PSTR | Hard coral |
| Bleached Pseudodiploria strigosa | PSTR_BL | Hard coral |
| Recently dead coral | RDC | Hard coral |
| Solenastrea bournoni | SBOU | Hard coral |
| Bleached Solenastrea bournoni | SBOU_BL | Hard coral |
| Scolymia | SCOL | Hard coral |
| Bleached Scolymia | SCOL_BL | Hard coral |
| Scolymia cubensis | SCUB | Hard coral |
| Bleached Scolymia cubensis | SCUB_BL | Hard coral |
| Solenastrea hyades | SHYA | Hard coral |
| Bleached Solenastrea hyades | SHYA_BL | Hard coral |
| Siderastrea | SIDE | Hard coral |
| Bleached Siderastrea | SIDE_BL | Hard coral |
| Stephanocoenia intersepta | SINT | Hard coral |
| Bleached Stephanocoenia intersepta | SINT_BL | Hard coral |
| Scolymia lacera | SLAC | Hard coral |
| Bleached Scolymia lacera | SLAC_BL | Hard coral |
| Solenastrea | SOLE | Hard coral |
| Bleached Solenastrea | SOLE_BL | Hard coral |
| Siderastrea radians | SRAD | Hard coral |
| Bleached Siderastrea radians | SRAD_BL | Hard coral |
| Stylaster roseus | SROS | Hard coral |
| Siderastrea siderea | SSID | Hard coral |
| Bleached Siderastrea siderea | SSID_BL | Hard coral |
| Aplysina cauliformis | ACAU | Other Invertebrates |
| Ascidian | ASCID | Other Invertebrates |
| Briareum | BRIA | Other Invertebrates |
| Cliona caribbaea | CCAR | Other Invertebrates |
| Cliona delitrix | CDEL | Other Invertebrates |
| Clionaidae | CLIO | Other Invertebrates |
| Erythropodium caribaeorum | ECAR | Other Invertebrates |
| Eunicea | EUNI | Other Invertebrates |
| Gorgonia | GGIA | Other Invertebrates |
| Gorgoniidae | GORG | Other Invertebrates |
| Gorgonia ventalina | GVEN | Other Invertebrates |
| Hydroids | HYDRO | Other Invertebrates |
| Hydrozoa | HZOA | Other Invertebrates |
| Other invertebrate | INV | Other Invertebrates |
| Millepora alcicornis | MALC | Other Invertebrates |
| Millepora complanata | MCOM | Other Invertebrates |
| Bleached Millepora complanata | MCOM_BL | Other Invertebrates |
| Millepora | MILLE | Other Invertebrates |
| Bleached Millepora | MILLE_BL | Other Invertebrates |
| Millepora squarrosa | MSQU | Other Invertebrates |
| Bleached Millepora squarrosa | MSQU_BL | Other Invertebrates |
| Muricea | MURI | Other Invertebrates |
| Muriceopsis | MURO | Other Invertebrates |
| Palythoa | PALY | Other Invertebrates |
| Plexaura homomalla | PHOM | Other Invertebrates |
| Plexauridae | PLEX | Other Invertebrates |
| Sea plumes | PLUME | Other Invertebrates |
| Plexaurella nutans | PNUT | Other Invertebrates |
| Pseudoplexaura | PSEUPLEX | Other Invertebrates |
| Pseudopterogorgia | PSEUPTER | Other Invertebrates |
| Pterogorgia | PTER | Other Invertebrates |
| Barrel Sponge | SPGB | Other Invertebrates |
| Encrusting sponge | SPGEN | Other Invertebrates |
| Sponge Other | SPGO | Other Invertebrates |
| Tube or Rod Sponge | SPGT | Other Invertebrates |
| Sea whips | WHIP | Other Invertebrates |
| Xestospongia muta | XMUT | Other Invertebrates |
| Zoanthid | ZOAN | Other Invertebrates |
| Sand | SAND | Soft Substrate |
| Cyanobacteria | CYAN | Other |
| Equipment | EQ | Other |
| Fish | FISH | Other |
| Shadow | SHAD | Other |
| Unknown | UNK | Other |
| Branching red algae | BRANC-RD | Algae |
| Crustose coralline algae | CCA | Algae |
| Dictyota | DICT | Algae |
| Halimeda | HALI | Algae |
| Lobophora | LOBO | Algae |
| Macroalgae | MACRO | Algae |
| Penicillus | PENI | Algae |
| Sargassum | SARG | Algae |
| Turbinaria (algae) | TURB | Algae |
| Turf algae | TURF | Algae |
| Valonia ventricosa | VVEN | Algae |
| Seagrass | SEAGRASS | Seagrass |
| Syringodium filiforme | SFIL | Seagrass |
| Thalassia | THAL | Seagrass |