| Name | Short Code | Functional Group |
|---|---|---|
| Agaricia agaricites | AAGA | Hard coral |
| Acropora cervicornis | ACER | Hard coral |
| Agaricia fragilis | AFRA | Hard coral |
| Agaricia | AGAR | Hard coral |
| Agaricia grahamae | AGRA | Hard coral |
| Agaricia humilis | AHUM | Hard coral |
| Agaricia lamarcki | ALAM | Hard coral |
| Acropora palmata | APAL | Hard coral |
| Acropora prolifera | APRO | Hard coral |
| Agaricia tenuifolia | ATEN | Hard coral |
| Bleached Hard Coral | BLC | Hard coral |
| Cladocora arbuscula | CARB | Hard coral |
| Colpophyllia natans | CNAT | Hard coral |
| Dendrogyra cylindrus | DCYL | Hard coral |
| Diploria labyrinthiformis | DLAB | Hard coral |
| Dichocoenia stokesi | DSTO | Hard coral |
| Eusmilia fastigiata | EFAS | Hard coral |
| Favia fragum | FFRA | Hard coral |
| Helioseris cucullata | HCUC | Hard coral |
| Isophyllia rigida | IRIG | Hard coral |
| Isophyllia sinuosa | ISIN | Hard coral |
| Mycetophyllia aliciae | MALI | Hard coral |
| Mussa angulosa | MANG | Hard coral |
| Manicina areolata | MARE | Hard coral |
| Madracis auretenra | MAUR | Hard coral |
| Montastraea cavernosa | MCAV | Hard coral |
| Mycetophyllia danaana | MDAN | Hard coral |
| Madracis decactis | MDEC | Hard coral |
| Mycetophyllia ferox | MFER | Hard coral |
| Madracis formosa | MFOR | Hard coral |
| Mycetophyllia lamarckana | MLAM | Hard coral |
| Meandrina meandrites | MMEA | Hard coral |
| Madracis pharensis | MPHA | Hard coral |
| Recent Dead Coral | NLC | Hard coral |
| Orbicella annularis | OANN | Hard coral |
| Oculina diffusa | ODIF | Hard coral |
| Orbicella faveolata | OFAV | Hard coral |
| Orbicella franksi | OFRA | Hard coral |
| Oculina robusta | OROB | Hard coral |
| Porites astreoides | PAST | Hard coral |
| Pseudodiploria clivosa | PCLI | Hard coral |
| Porites divaricata | PDIV | Hard coral |
| Porites furcata | PFUR | Hard coral |
| Other Hard Coral Bleached (white) | PLC | Hard coral |
| Porites | PORI | Hard coral |
| Porites porites | PPOR | Hard coral |
| Pseudodiploria strigosa | PSTR | Hard coral |
| Solenastrea bournoni | SBOU | Hard coral |
| Scolymia cubensis | SCUB | Hard coral |
| Solenastrea hyades | SHYA | Hard coral |
| Stephanocoenia intersepta | SINT | Hard coral |
| Scolymia lacera | SLAC | Hard coral |
| Siderastrea radians | SRAD | Hard coral |
| Siderastrea siderea | SSID | Hard coral |
| Scolymia wellsi | SWEL | Hard coral |
| Tubastraea coccinea | TCOC | Hard coral |
| Sponge | AGSPON | Other Invertebrates |
| Aggressive invertebrate | AINV | Other Invertebrates |
| Anemone | ANEM | Other Invertebrates |
| Briareum asbestinum | BASB | Other Invertebrates |
| Soft coral_bleached | CBland_BL | Other Invertebrates |
| Cliona caribbaea | CCAR | Other Invertebrates |
| Cliona delitrix | CDEL | Other Invertebrates |
| Cliona spp. | CLIO | Other Invertebrates |
| Colonial anemones: Corallimorphs | CNCAC | Other Invertebrates |
| Corallimorpharia | Collimorph | Other Invertebrates |
| Soft Coral | CoralBland | Other Invertebrates |
| Cliona varians | CVAR | Other Invertebrates |
| Worms: Polychaetes: Tube worms | CWT | Other Invertebrates |
| Zooxanthellate Cliona | CZOO | Other Invertebrates |
| Erythropodium caribaeorum | ECAR | Other Invertebrates |
| Encrusting sponge | ESPON | Other Invertebrates |
| Gorgonia spp. | GORG | Other Invertebrates |
| Millepora alcicornis | MALC | Other Invertebrates |
| Millepora complanata | MCOM | Other Invertebrates |
| Millepora squarrosa | MSQU | Other Invertebrates |
| Millepora striata | MSTR | Other Invertebrates |
| Other sessile invertebrates | OINV | Other Invertebrates |
| Other Invertebrates | Otr_Invert | Other Invertebrates |
| Palythoa caribaeorum | PCAR | Other Invertebrates |
| Sabellid-I | SABI | Other Invertebrates |
| Echinoderms: sea urchin | SEAU | Other Invertebrates |
| Serpulidae worm | SERP | Other Invertebrates |
| 108 Siphonodictyon sp. FLS | SIPH | Other Invertebrates |
| Svenzea zeai | SZEA | Other Invertebrates |
| Trididemnum solidum | TSOL | Other Invertebrates |
| Erect sponge | TSPON | Other Invertebrates |
| Tunicate | TUNI | Other Invertebrates |
| Zoanthus | ZOA | Other Invertebrates |
| Biofilm | FILM | Soft Substrate |
| Mud | MUD | Soft Substrate |
| Sand | SAND | Soft Substrate |
| Sediment | STA | Soft Substrate |
| CRED-CCA growing on hard substrate | CCAenSUDUR | Hard Substrate |
| Trash | Basura | Other |
| Cyanobacteria | CYAN | Other |
| Unknown | Desconocid | Other |
| Unclear | HOLE | Other |
| All other | OTHER | Other |
| Rubble | RUB | Other |
| Shadow | Sombra | Other |
| Turf algal sediment matrix | TAM | Other |
| Transect hardware | Transecto | Other |
| Brown fleshy algae | BFMA | Algae |
| Brown Macroalgae | BrownM | Algae |
| Caulerpa | CAUL | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Cladophora sp. | CLAD | Algae |
| CCA_Dead | DCCA | Algae |
| Dictyota | DICT | Algae |
| Galaxaura | GALA | Algae |
| Green Macroalgae | GCMA | Algae |
| Green fleshy algae | GFMA | Algae |
| Halimeda | HALI | Algae |
| Halimeda mat | HALM | Algae |
| Jania | JANI | Algae |
| Lobophora | LOBO | Algae |
| Macroalgae | Macroalga | Algae |
| Microdictyon | MICR | Algae |
| Benthic Microalgae on Sand | MicroB_are | Algae |
| Padina | PADI | Algae |
| Peyssonnelia | PEY | Algae |
| Macroalgae: Articulated calcareous: red | RCMA | Algae |
| Red Macroalgae | RedM | Algae |
| Red fleshy algae | RFMA | Algae |
| Sargassum | SARG | Algae |
| Stypopodium spp. | STYP. | Algae |
| Turf algae | TA | Algae |
| Turf and sand | TAS | Algae |
| Turbinaria (algae) | TURB | Algae |
| Valonia spp. | VALO | Algae |
| Seagrass | SEAG | Seagrass |