| Name | Short Code | Functional Group |
|---|---|---|
| 1 - slight pale bleaching | 1_slt pale | Hard coral |
| 2 - very pale bleaching | 2_vpaleblc | Hard coral |
| 3 - polar white bleaching | 3_white | Hard coral |
| Pavona chiriquiensis | PavChi | Hard coral |
| Pavona clavus | PavClav | Hard coral |
| Pavona gigantea | PavGig | Hard coral |
| Pocillopora capitata | PocCap | Hard coral |
| Pocillopora meandrina | PocMea | Hard coral |
| Porites lobata | PorLob | Hard coral |
| Psammocora | Psammo | Hard coral |
| Unknown Coral | Un coral | Hard coral |
| No benthic cover | 010 | Other Invertebrates |
| Aplysina cauliformis | Acau | Other Invertebrates |
| Ascidian | ASCD | Other Invertebrates |
| Gorgoniidae | GORGONII | Other Invertebrates |
| Gorgonia spp. | GORSPP | Other Invertebrates |
| Palythoa | PALYTHO | Other Invertebrates |
| Sponge | SP | Other Invertebrates |
| Unknown Sponge/Tunicate | SpTun | Other Invertebrates |
| Zoanthid | Zoanthid | Other Invertebrates |
| Sand | Sand | Soft Substrate |
| Rock | Rock | Hard Substrate |
| Equipment | EQ | Other |
| Fish | FISH | Other |
| Rubble | Rubble | Other |
| Shadow | SHAD | Other |
| Unknown | Unk | Other |
| Amphiroa sp. | Amphi | Algae |
| bleached cca | B_CCA | Algae |
| brown encrusting algae | BEA | Algae |
| Branching red algae | BRANC-RD | Algae |
| Caulerpa racemosa | CauRac | Algae |
| CCA growing on rubble | CCA_Rub | Algae |
| Corallina officinalis (substratum) | COS | Algae |
| Dictyota | Dictyota | Algae |
| Green turfing algae | GTA | Algae |
| Hypnea | Hyp | Algae |
| Jania | Jania | Algae |
| Macroalgae | MAL | Algae |
| Padina | Padina | Algae |
| Pink CCA | pCCA | Algae |
| Red CCA | R_CCA | Algae |
| Red Turf | RedTurf | Algae |
| Rhodymenia Sp. | Rhod | Algae |
| Sargassum | Sargassum | Algae |
| Spatoglossum sp. | Spato | Algae |
| Turf and sand | Turf_sand | Algae |
| Unknown Algae | UA | Algae |
| Ulva | Ulva | Algae |