| Name | Short Code | Functional Group |
|---|---|---|
| Acropora (branching) | ACBR | Hard coral |
| Acropora (digitate) | ACDIGI | Hard coral |
| Acropora (tabulate) | ACTAB | Hard coral |
| Bleached Hard Coral | BLEACH | Hard coral |
| Hard Coral (branching) | BRANCH_HC | Hard coral |
| Hard Coral (columnar) | COLUMN_HC | Hard coral |
| Diploastrea | DIPLOASTRE | Hard coral |
| Echinopora | ECHINO | Hard coral |
| Hard Coral (encrusting) | ENCRUST_HC | Hard coral |
| Merulinidae | F.MERULIN | Hard coral |
| Hard Coral (foliose) | FOLIOSE_HC | Hard coral |
| Galaxea | GALAXEA | Hard coral |
| Turbinaria (coral) | HC.TURB | Hard coral |
| Hard Coral (massive) | MASS_HC | Hard coral |
| Fungiidae | MUSH | Hard coral |
| Non-Scleractinian Hard Corals | NOSCLERA | Hard coral |
| Hard Coral Other | OTHHC | Hard coral |
| Partial Bleaching | PARBLEACH | Hard coral |
| Platygyra | PLATYGYRA | Hard coral |
| Pocillopora | POCILLOPOR | Hard coral |
| Porites_encrusting | PORENCR | Hard coral |
| CRED-Porites spp_massive | PORMASS | Hard coral |
| Recently dead coral | RDC | Hard coral |
| Seriatopora | SERIATOPOR | Hard coral |
| Stylophora | STYLOPHORA | Hard coral |
| Hard Coral Tabulate | TABULAR_HC | Hard coral |
| Stylophora wellsi | WELLSI | Hard coral |
| Anemone | ANEMONE | Other Invertebrates |
| Ascidian | ASCID | Other Invertebrates |
| Bryozoan | BRYOZ | Other Invertebrates |
| Crown of Thorns Sea Star | COTS | Other Invertebrates |
| Millepora | FIRE | Other Invertebrates |
| Sea cucumber | HOLOTH | Other Invertebrates |
| Hydroid | HYDROID | Other Invertebrates |
| Mobile invertebrates | MOBINV | Other Invertebrates |
| softcoral_ nephtheidae | NEPHTH | Other Invertebrates |
| Bivalve | OYST | Other Invertebrates |
| Sarcophyton | SARCOPH | Other Invertebrates |
| Soft coral_bleached | SCBLEACH | Other Invertebrates |
| Other Soft Corals | SCOTH | Other Invertebrates |
| Sinularia | SINULAR | Other Invertebrates |
| Sponges: Branching, Rope Forms | SPBRAN | Other Invertebrates |
| Sponge: Encrusting | SPENCR | Other Invertebrates |
| Sponges: Massive forms: Simple | SPMASS | Other Invertebrates |
| Sponge Other | SPOTH | Other Invertebrates |
| Tridacna: Giant clam | TRIDAC | Other Invertebrates |
| Echinoderms: sea urchin | URCH | Other Invertebrates |
| Vermatid mollusc | VERM | Other Invertebrates |
| Corals: Black & Octocorals: Whip | WHIP | Other Invertebrates |
| XENIIDAE | XENIID | Other Invertebrates |
| Zoanthid | ZOAN | Other Invertebrates |
| Rhytisma | RHYTIS | Soft Substrate |
| sediment (fine) | SANDF | Soft Substrate |
| Thin Sediment over Rock | SEDCOVSUB | Soft Substrate |
| Pavement | PAVE | Hard Substrate |
| Cyanobacteria_filamentous | CYANOFIL | Other |
| Deep Substrate | DEEP | Other |
| Deep Sand | DEEP.SAND | Other |
| Dead coral with algae | DHCALG | Other |
| Disease | DISEASE | Other |
| Fish | FISH | Other |
| Blurry | NOID | Other |
| Condition_Paling | PALING | Other |
| Rubble | RUBB | Other |
| Coarse Sand | SANDB | Other |
| Unknown Invert | SESS.OTH | Other |
| Shadow | SHAD | Other |
| CREP-T1 Tape/Wand | TAPE_WAND_ | Other |
| Trash | TRASH | Other |
| Unknown | UNK | Other |
| Water | WATER | Other |
| Encrusting Algae | ALG.CRUST | Algae |
| Macroalgae: Encrusting: brown | BRO.ALG.CR | Algae |
| Caulerpa | CAUL | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Dictyota | DICT | Algae |
| Cyanobacteria_gelatinous | GELCYANO | Algae |
| Halimeda | HALI | Algae |
| Lobophora | LOBO | Algae |
| Unknown macroalgae | MACOTH | Algae |
| Padina | PADI | Algae |
| CRED-Peyssonnelia spp | PEYSSON | Algae |
| CCA_knobby | RHOCCA | Algae |
| Sargassum | SARG | Algae |
| Turf algae | TA | Algae |
| Turbinaria (algae) | TURB | Algae |
| Seagrass | SEAG | Seagrass |