| Name | Short Code | Functional Group |
|---|---|---|
| Acanthastrea | ACANTHASTR | Hard coral |
| Acropora (branching) | AC.BRA | Hard coral |
| Acropora (digitate) | AC.DIGI | Hard coral |
| Acropora (tabulate) | AC.TAB | Hard coral |
| Astrea | ASTREA | Hard coral |
| Astreopora | ASTREO | Hard coral |
| Coelastrea | COELA | Hard coral |
| Coscinaraea | COSCINAR | Hard coral |
| Ctenactis | CTENACTIS | Hard coral |
| Cyphastrea | CYPHASTREA | Hard coral |
| Diploastrea | DIPLOASTRE | Hard coral |
| Dipsastraea | DIPSAST | Hard coral |
| Echinopora Branching | ECH.BRA | Hard coral |
| Echinopora_encrusting | ECH.ENCR | Hard coral |
| Echinophyllia | ECHINOPHYL | Hard coral |
| Euphyllia | EUPHYLLIA | Hard coral |
| Acroporidae Other | F.ACROP | Hard coral |
| Agariciidae | F.AGARICID | Hard coral |
| Favites_encrusting | FAV.ENCR | Hard coral |
| Favites | FAVITES | Hard coral |
| Favites (massive) | FAV.MASS | Hard coral |
| Coscinaraeidae | F.COSCIN | Hard coral |
| Euphyllidae | F.EUPHYLL | Hard coral |
| Fungiidae | F.FUNGI | Hard coral |
| Leptastreidae | F.LEPTAST | Hard coral |
| Lobophyllidae | F.LOBOPHYL | Hard coral |
| Merulinidae | F.MERULIN | Hard coral |
| Plerogyridae | F.PLEROGRY | Hard coral |
| Pocilloporidae | F.POCILLO | Hard coral |
| Poritidae (massive) | F.PORITIDA | Hard coral |
| Psammocoridae | F.PSAMMOCO | Hard coral |
| Siderastreidae | F.SIDERAST | Hard coral |
| Fungia | FUNCIR | Hard coral |
| Galaxea | GALAXEA | Hard coral |
| Gardineroseris | GARDINER | Hard coral |
| Goniastrea | GONIASTREA | Hard coral |
| CRED-Goniopora/Alveopora spp | GONIOPORA | Hard coral |
| Gyrosmilia | GYROSMILIA | Hard coral |
| Halomitra | HALOMITRA | Hard coral |
| Hard Coral (branching) | HC.BRANCH | Hard coral |
| Hard Coral (columnar) | HC.COLUMN | Hard coral |
| Hard Coral Digitate | HC.DIGI | Hard coral |
| Hard Coral (encrusting) | HC.ENCRUS | Hard coral |
| Hard Coral (foliose) | HC.FOLIOSE | Hard coral |
| Hard Coral (free-living) | HC.FUNGID | Hard coral |
| Hard Coral (massive) | HC.MASS | Hard coral |
| Hard Coral Tabulate | HC.TABLE | Hard coral |
| Turbinaria (coral) | HC.TURB | Hard coral |
| Hard Coral Other | HC.UNKN | Hard coral |
| Herpolitha | HERPOLITHA | Hard coral |
| Hydnophora | HYDNOPHORA | Hard coral |
| Leptoria | LEPTORIA | Hard coral |
| Leptoseris | LEPTOSERIS | Hard coral |
| Leptastrea | LETPASTREA | Hard coral |
| Lobophyllia | LOBOPHYLL | Hard coral |
| Meandroid (brain) corals | MEANDRINID | Hard coral |
| Merulina | MERULINA | Hard coral |
| Montipora (branching) | MON.BRA | Hard coral |
| Montipora (encrusting) | MON.ENC | Hard coral |
| Montipora (foliose) | MON.FOL | Hard coral |
| Montipora_massive | MON.MASS | Hard coral |
| Mycedium | MYCEDIUM | Hard coral |
| Non-Scleractinian Hard Corals | NOSCLERA | Hard coral |
| Oulophyllia | OULOPHYLLI | Hard coral |
| Oxypora | OXYPORA | Hard coral |
| Partial Bleaching | PA.BLEACH | Hard coral |
| Pachyseris | PACHYSERIS | Hard coral |
| Pavona | PAVONA | Hard coral |
| Platygyra | PLATYGYRA | Hard coral |
| Plerogyra | PLEROGYRA | Hard coral |
| Pocillopora | POCILLOPOR | Hard coral |
| Podabacia | PODABACIA | Hard coral |
| Porites (branching) | POR.BRA | Hard coral |
| Porites_columnar | POR.COL | Hard coral |
| Porites_encrusting | POR.ENCR | Hard coral |
| CRED-Porites spp_foliose | POR.FOL | Hard coral |
| CRED-Porites spp_massive | POR.MASS | Hard coral |
| Psammocora | PSAMMOCORA | Hard coral |
| Sediment buried coral | SEDORG | Hard coral |
| Seriatopora | SERIATOPOR | Hard coral |
| Stylocoeniella | STYLOCO | Hard coral |
| Stylophora | STYLOPHORA | Hard coral |
| Stylophora wellsi | WELLSI | Hard coral |
| Alcyoniidae | ALCYON | Other Invertebrates |
| Anemone | ANEMONE | Other Invertebrates |
| Antipatharia | ANTIPATH | Other Invertebrates |
| Ascidian | ASCID | Other Invertebrates |
| Bryozoan | BRYOZ | Other Invertebrates |
| 51_encrusting_corallimopharians | CORALIM | Other Invertebrates |
| Crown of Thorns Sea Star | COTS | Other Invertebrates |
| Millepora | FIRE | Other Invertebrates |
| Gorgoniidae | GORGO | Other Invertebrates |
| Sea cucumber | HOLOTH | Other Invertebrates |
| Hydroid | HYDROID | Other Invertebrates |
| CRED-Hydrocoral | LACE | Other Invertebrates |
| Lithophyton | LITHO | Other Invertebrates |
| Mobile, crab | MF.ARTH | Other Invertebrates |
| Echinoderms | MF.ECHIN | Other Invertebrates |
| Mobile Mollusk | MF.MOLL | Other Invertebrates |
| Sea slug | MF.NUDI | Other Invertebrates |
| softcoral_ nephtheidae | NEPHTH | Other Invertebrates |
| Bivalve | OYST | Other Invertebrates |
| Sarcophyton | SARCOPH | Other Invertebrates |
| Other Soft Corals | SC.OTH | Other Invertebrates |
| Sinularia | SINULAR | Other Invertebrates |
| Sponges: Massive forms: Barrels | SPON.BAR | Other Invertebrates |
| Sponges: Branching, Rope Forms | SPON.BRAN | Other Invertebrates |
| Sponge: Encrusting | SPON.ENCR | Other Invertebrates |
| Sponges: Massive forms: Simple | SPON.MASS | Other Invertebrates |
| Sponge Other | SPON.OTH | Other Invertebrates |
| Tube or Rod Sponge | SPON.TUBE | Other Invertebrates |
| Tridacna: Giant clam | TRIDAC | Other Invertebrates |
| Echinoderms: sea urchin | URCH | Other Invertebrates |
| Long spines sea urchin | URCH.DIA | Other Invertebrates |
| Vermatid mollusc | VERM.MOLL | Other Invertebrates |
| XENIIDAE | XENIID | Other Invertebrates |
| Zoanthid | ZOAN | Other Invertebrates |
| Rhytisma | RHYTIS | Soft Substrate |
| Sand | SAND | Soft Substrate |
| Thin Sediment over Rock | SEDCOVSUB | Soft Substrate |
| Pavement | PAVE | Hard Substrate |
| Rhodoliths | RHODO | Hard Substrate |
| Condition_Fully Bleached | BLEACH | Other |
| Cyanobacteria_filamentous | CYANOFIL | Other |
| Deep Substrate | DEEP | Other |
| Deep Sand | DEEP.SAND | Other |
| Dendrophylliidae | DENDRO | Other |
| Dead coral with algae | DHC.ALG | Other |
| other disease | DISEASE | Other |
| Ellisellidae | ELLISE | Other |
| Condition_Epiphytized | EPIPHY | Other |
| Fish | FISH | Other |
| Fishing gear | FISH.GEAR | Other |
| Condition_Full Bleach & Partial Mortality | FULLBL.MOR | Other |
| Blurry | NO.ID | Other |
| Dead | OLD.DEAD | Other |
| Condition_Paling | PALING | Other |
| Condition_Partial Bleaching & Mortality | PAR.BLMOR | Other |
| Condition_Partial Mortality | PMO25 | Other |
| Condition_Healthy | PMO75 | Other |
| Not Applicable | PMR25 | Other |
| Trash: Human Origin | PMR75 | Other |
| Condition_Recent mortality | REC.DEAD | Other |
| Rubble | RUBB | Other |
| Condition_Scenesced | SCENESCE | Other |
| Unknown Invert | SESS.OTH | Other |
| Shadow | SHAD | Other |
| CREP-T1 Tape/Wand | TAPE.OTH | Other |
| Trash | TRASH | Other |
| Unknown | UNK | Other |
| Water | WATER | Other |
| Condition_Wilted | WILT | Other |
| Acanthophora spicifera | ACANTHO | Algae |
| Acetabularia spp. | ACETAB | Algae |
| Encrusting Algae | ALG.CRUST | Algae |
| CREP-T3a Amansia spp | AMANSIA | Algae |
| Amphiroa sp. | AMPHIR | Algae |
| Asparagopsis | ASPARA | Algae |
| Boodlea | BOOD | Algae |
| Macroalgae: Encrusting: brown | BR.ALG.CR | Algae |
| Bryopsis spp. | BRYOP | Algae |
| Caulerpa | CAUL | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| bleached cca | CCABLEA | Algae |
| CCA: On dead coral | CCADC | Algae |
| CCA_Dead | CCADEAD | Algae |
| Green encrusting algae | CCAGREEN | Algae |
| CCA_Patchy | CCAPATCH | Algae |
| CCA_knobby | CCARHO | Algae |
| CCA growing on rubble | CCA.RUB | Algae |
| Chlorodesmis sp. | CHLORO | Algae |
| Codium | CODIUM | Algae |
| Macroalgae: Globose: brown: Colpomenia | COLPO | Algae |
| Cyanobacteria_gelatinous | CYANOGEL | Algae |
| Damselfish turf + sediments | DAM.TURF | Algae |
| Macroalgae: Globose: green: Derbesia | DERB | Algae |
| Dictyota | DICT | Algae |
| Dictyosphaeria | DICTYOS | Algae |
| Galaxaura | GALAX | Algae |
| Gelidiella spp. | GELIDI | Algae |
| Gelidium spp | GELIDIUM | Algae |
| Gibsmithia sp | GIBSM | Algae |
| Green Rock | GREENPAV | Algae |
| Halimeda | HALI | Algae |
| Halymenia sp. | HALY | Algae |
| Hydroclathrus | HYDROC | Algae |
| Hypnea | HYPNEA | Algae |
| Jania | JANI | Algae |
| Laurencia spp. | LAUR | Algae |
| Liagora | LIAG | Algae |
| Lobophora | LOBO | Algae |
| Unknown macroalgae | MA.UNK | Algae |
| Neomeris | NEOM | Algae |
| Padina | PADI | Algae |
| Palisada perforata | PALISADA | Algae |
| CRED-Peyssonnelia spp | PEYSSON | Algae |
| Polycladia myrica | POLYC | Algae |
| Sargassum | SARG | Algae |
| Turbinaria (algae) | TURB | Algae |
| Turf algae | TURF | Algae |
| Tydemania spp. | TYDEM | Algae |
| Udotea spp. | UDOTA | Algae |
| Ulva | ULVA | Algae |
| Valonia spp. | VALO | Algae |
| Seagrass | SEAG | Seagrass |
| Cymodocea | SEAG.CYMO | Seagrass |
| Halodule | SEAG.HALO | Seagrass |
| Halophila | SEAG.HALOP | Seagrass |
| Thalassia | SEAG.THAL | Seagrass |