| Name | Short Code | Functional Group |
|---|---|---|
| Acropora cervicornis | AcrCerv | Hard coral |
| Acropora | Acropora | Hard coral |
| Acropora palmata | AcrPalm | Hard coral |
| Agaricia agaricites | AgAga | Hard coral |
| Agaricia | Agaricia | Hard coral |
| Agaricia humilis | AgHum | Hard coral |
| Agaricia tenuifolia | AgTen | Hard coral |
| Hard Coral (branching) | C_branch | Hard coral |
| Colpophyllia natans | CoNat | Hard coral |
| Dendrogyra cylindrus | DenCyl | Hard coral |
| Diploria labyrinthiformis | DiplLab | Hard coral |
| Eusmilia fastigiata | EFAS | Hard coral |
| Favia fragum | FaviaFrag | Hard coral |
| Stylaster roseus | Fire Sros | Hard coral |
| Hard Coral (encrusting) | HC_encr | Hard coral |
| Hard Coral (foliose) | HC_fol | Hard coral |
| Hard Coral (massive) | HC_massive | Hard coral |
| Hard Coral Solitary | HcSo | Hard coral |
| Helioseris cucullata | HeCuc | Hard coral |
| Isophyllia sinuosa | IsophSin | Hard coral |
| Manicina areolata | MAA | Hard coral |
| Madracis auretenra | MadAure | Hard coral |
| Madracis carmabi | MadCarm | Hard coral |
| Madracis | Madracis | Hard coral |
| Meandrina | MEAN | Hard coral |
| Meandrina jacksoni | MEANJ | Hard coral |
| Meandrina meandrites | MM | Hard coral |
| Montastraea cavernosa | MontaCav | Hard coral |
| Montastraea | Montastr | Hard coral |
| Mussa angulosa | MUSANG | Hard coral |
| Mycetophyllia aliciae | MycetAli | Hard coral |
| Mycetophyllia danaana | MycetDan | Hard coral |
| Mycetophyllia ferox | MycetFer | Hard coral |
| Mycetophyllia | Mycetophy | Hard coral |
| Orbicella annularis | OrbAnn | Hard coral |
| Orbicella faveolata | OrbFav | Hard coral |
| Orbicella franksi | OrbFrank | Hard coral |
| Orbicella | Orbicella | Hard coral |
| Porites astreoides | PorAstr | Hard coral |
| Porites furcata | PorFurc | Hard coral |
| Porites | Porites | Hard coral |
| Porites porites | PorPor | Hard coral |
| Pseudodiploria | PSEU | Hard coral |
| Pseudodiploria clivosa | PseuCliv | Hard coral |
| Pseudodiploria strigosa | PseuStrig | Hard coral |
| Siderastrea | Siderastr | Hard coral |
| Siderastrea radians | SidRad | Hard coral |
| Siderastrea siderea | SidSid | Hard coral |
| Antillogorgia spp. | ANTSPP | Other Invertebrates |
| Ball Sponge | BallSpong | Other Invertebrates |
| Cliona | Clio | Other Invertebrates |
| Encrusting sponge | ENSP | Other Invertebrates |
| Eunicea spp. | EUNSPP | Other Invertebrates |
| Gorgonia spp. | GORSPP | Other Invertebrates |
| Gorgonia ventalina | Gven | Other Invertebrates |
| Cnidaria: Corals: Black & Octocorals | MGCB | Other Invertebrates |
| Millepora alcicornis | MILA | Other Invertebrates |
| Millepora complanata | MILC | Other Invertebrates |
| Millepora | Millepora | Other Invertebrates |
| Millepora squarrosa | MIS | Other Invertebrates |
| Monanchora arbuscula | MONA | Other Invertebrates |
| Muricea spp. | MURSPP | Other Invertebrates |
| Plexaura spp. | PLESPP | Other Invertebrates |
| Pseudoplexaura spp. | PSESPP | Other Invertebrates |
| Sea fans/plumes/branching/whipes | SINV_SFC_E | Other Invertebrates |
| Sponges: Vase | SINV_SPO_V | Other Invertebrates |
| Sponges: Massive forms: Barrels | SMB | Other Invertebrates |
| Spirastrella sp. | Spir | Other Invertebrates |
| Tube or Rod Sponge | SPTU | Other Invertebrates |
| Antipathes sp. | ANSP | Other |
| Amphiroa sp. | Amphi | Algae |
| CCA (crustose coralline algae) | CCA | Algae |
| Dictyota | Dictyota | Algae |
| EAM: Dead Hard Coral | EAM_DHC | Algae |
| EAM: with sediment | EAMsedi | Algae |
| EAM: Rock or Substrate | EAM_Sub | Algae |
| Galaxaura | Galaxaura | Algae |
| Halimeda | Halimeda | Algae |
| Hincksia | Hink | Algae |
| Jania | Jania | Algae |
| Laurencia | Laur | Algae |
| Lobophora | Lobophora | Algae |
| Padina | Padina | Algae |
| Peyssonnelia | Peysson | Algae |
| Sargassum | Sargassum | Algae |
| Stypopodium zonale | STYZO | Algae |
| Symploca hydnoides | Symhyd | Algae |
| Tricleocarpa | TRIcleocar | Algae |
| Turbinaria (algae) | Turbin | Algae |
| Thalassia | Thalassia | Seagrass |
| Thalassia testudinum | ThalTes | Seagrass |