| Name | Short Code | Functional Group |
|---|---|---|
| Agaricia fragilis | AGF | Hard coral |
| Agaricia humilis | AGH | Hard coral |
| Astrangia | AST | Hard coral |
| Bleached coral point | BL | Hard coral |
| Coral | C | Hard coral |
| Favia leptophylla | FAL | Hard coral |
| Favia gravida | FAV | Hard coral |
| Madracis decactis | MAD | Hard coral |
| Meandrina braziliensis | MEB | Hard coral |
| Mussismilia harttii | MHT | Hard coral |
| Millepora spp. | MIL2 | Hard coral |
| Montastraea cavernosa | MOC | Hard coral |
| Mussismilia spp | MSP | Hard coral |
| Mussismilia 2 | MSP2 | Hard coral |
| Mussismilia braziliensis | MUB | Hard coral |
| Mussismilia hispida | MUH | Hard coral |
| Phyllangia | PHY | Hard coral |
| Porites astreoides | POA | Hard coral |
| Porites branneri | POB | Hard coral |
| Polymastia janeirensis | POJ | Hard coral |
| Polycyathus spp | POL | Hard coral |
| Protopalythoa Spp | PRP | Hard coral |
| Scolymia wellsi | SCO | Hard coral |
| Siderastrea | SID | Hard coral |
| Siderastrea 2 | SID2 | Hard coral |
| Siderastrea stellata | SIDS | Hard coral |
| Stephanocoenia michellini | STE | Hard coral |
| Stylaster roseus | STR | Hard coral |
| Tubastrea | TUB | Hard coral |
| Anemone | ANM | Other Invertebrates |
| 51_arborescent_sponge | ARB1 | Other Invertebrates |
| Sponge (arborescent) | ARB2 | Other Invertebrates |
| Sponge_arborescent | ARB3 | Other Invertebrates |
| Bivalve | BIV | Other Invertebrates |
| Botryllus niger | BON | Other Invertebrates |
| Carijoa riisei | CAR | Other Invertebrates |
| Crella (Grayella) brasiliensis | CBRA | Other Invertebrates |
| Cirripedia - Barnacle | CIR | Other Invertebrates |
| Didemnum sp | DID | Other Invertebrates |
| Dragmacidon reticulata | DRR | Other Invertebrates |
| Echinoderms: Sea stars | EST | Other Invertebrates |
| Eudendrium carneum | EUC | Other Invertebrates |
| Sponge: globular | GLO1 | Other Invertebrates |
| Sponge_globular | GLO2 | Other Invertebrates |
| Guitarra sepia | GUSE | Other Invertebrates |
| Sponge: Encrusting | INC1 | Other Invertebrates |
| Sponge_encrusting | INC2 | Other Invertebrates |
| Encrusting sponge | INC3 | Other Invertebrates |
| Ircinia strobilina | ISTRO | Other Invertebrates |
| Macrorhynchia philippina | MAP | Other Invertebrates |
| Monanchora arbuscula | MARB | Other Invertebrates |
| 51_massive_sponge | MAS1 | Other Invertebrates |
| Sponge (massive) | MAS2 | Other Invertebrates |
| Sponge: Massive | MAS3 | Other Invertebrates |
| Monanchora brasiliensis | MBRA | Other Invertebrates |
| Mycale (Carmia) microsigmatosa | MCM | Other Invertebrates |
| Millepora alcicornis | MIA | Other Invertebrates |
| Millepora braziliensis | MIB | Other Invertebrates |
| Millepora | MIL | Other Invertebrates |
| Millepora_encrusting | MILI | Other Invertebrates |
| Millepora nitida | MIN | Other Invertebrates |
| Crinoids. | MINV_CRI | Other Invertebrates |
| Molluscs | MOL | Other Invertebrates |
| Anthozoa | OANT | Other Invertebrates |
| Ascidian | OASC | Other Invertebrates |
| Bryozoan | OBRY | Other Invertebrates |
| Echinoderms | OECH | Other Invertebrates |
| Hydrozoa | OHYD | Other Invertebrates |
| Sponge, unidentified | OSPO2 | Other Invertebrates |
| Sponge Other | OSPO3 | Other Invertebrates |
| Sponge - any | OSPO4 | Other Invertebrates |
| Sponge | OSPO5 | Other Invertebrates |
| White Sea Urchin | OUB | Other Invertebrates |
| Black Sea Urchin | OUP | Other Invertebrates |
| Palythoa caribaeorum | PAC | Other Invertebrates |
| Palythoa | PAL | Other Invertebrates |
| 51_papillate_sponge | PAP1 | Other Invertebrates |
| Sponge_papillate | PAP2 | Other Invertebrates |
| Sponge: Papilae | PAP3 | Other Invertebrates |
| Parazoanthus cf axinellae | PAZ | Other Invertebrates |
| Sponge_pedunculate | PED | Other Invertebrates |
| Phyllogorgia dilatata | PHD | Other Invertebrates |
| Placospongia | PLACO | Other Invertebrates |
| Plexaura spp. | PLE | Other Invertebrates |
| Plexaurella grandiflora | PLG | Other Invertebrates |
| Plexaurella regia | PLR | Other Invertebrates |
| Worms: Polychaetes | POLY | Other Invertebrates |
| Sponge_tubular | TUB1 | Other Invertebrates |
| Xestospongia muta | XEM | Other Invertebrates |
| Zoanthus sociatus_ | ZOS | Other Invertebrates |
| Substrate: Unconsolidated (soft) | ARC | Soft Substrate |
| Cyanobacteria | CIAN2 | Other |
| Other Cyanobacteria 3 | CIAN3 | Other |
| Cyanobacteria films | CIAN4 | Other |
| other crustacean | OCRU | Other |
| other disease | OD | Other |
| Out of quadrat | OOQ | Other |
| Sponge: other | OSPO | Other |
| Other Turf | OTF | Other |
| Shadow | SHAD | Other |
| Calcareous Turf | TCC | Other |
| Turf: filamentous | TFL | Other |
| Unknown | Unk | Other |
| Quadrat | WAND | Other |
| Amphiroa sp. | A/J | Algae |
| Macroalgae:ArticulatedCalcareous:Red:Amphiroa | A/J2 | Algae |
| Asparagopsis taxiformis | ASPT | Algae |
| Arthrocardia | ATH | Algae |
| Bryopsis pennata | BRPN | Algae |
| Bryopsis spp. | BRSP | Algae |
| Caulerpa | CAU | Algae |
| Caulerpa spp. | CAU2 | Algae |
| Caulerpa cupressoides | CAUC | Algae |
| Caulerpa microphysa | CAUM | Algae |
| Caulerpa mexicana | CAUMEX | Algae |
| Caulerpa verticillata | CAUV | Algae |
| Canistrocarpus cervicornis | CCV | Algae |
| Chaetomorpha Spp. | CHAE | Algae |
| Champia parvula | CHP | Algae |
| Microalgae: cyanobacteria | CIAN1 | Algae |
| Cladophora sp. | CLAD | Algae |
| Calcifying calcareous crustose algae: DHC | CNA/CC | Algae |
| Codium | COD | Algae |
| Codium intertextum | COI | Algae |
| Colpomenia sinuosa | COL | Algae |
| Dictyopteris | DICP | Algae |
| Dictyopteris 2 | DICP2 | Algae |
| Dictyopteris 3 | DICP3 | Algae |
| Dictyopteris delicatula | DICPD | Algae |
| Dictyopteris jamaicensis | DICPJM | Algae |
| Dictyopteris jolyana | DICPJO | Algae |
| Dictyopteris justii | DICPJT | Algae |
| Dictyopteris plagiogramma | DICPP | Algae |
| Dictyota spp | DICT | Algae |
| Dictyota Other 2 | DICT2 | Algae |
| Dictyota Other 3 | DICT3 | Algae |
| Dictyota | DICT4 | Algae |
| Other Dictyota 5 | DICT5 | Algae |
| Other Dictyota 6 | DICT6 | Algae |
| Other Dictyota 7 | DICT7 | Algae |
| Dictyota ciliolata | DICTC | Algae |
| Dictyota menstrualis | DICTM | Algae |
| Dictyota pulchella | DICTP | Algae |
| Dictyosphaeria versluysii | DICVERS | Algae |
| Digenea simplex | DIGS | Algae |
| Galaxaura spp. | GAL | Algae |
| Gelidium floridanum | GFLO | Algae |
| Gelidiopsis | GLPS | Algae |
| Gelidium pusillum | GPUS | Algae |
| Haliptilon cubense | HALC | Algae |
| Hypnea musciformis | HYP | Algae |
| Laurencia spp. | LAU | Algae |
| Lobophora variegata | LOV | Algae |
| Macroalgae: Articulated calcareous | OMCA | Algae |
| Articulated Calcareous Macroalgae | OMCA2 | Algae |
| Other Articulated Calcareous Macroalgae 3 | OMCA3 | Algae |
| Other Macroalgae (coriacea) | OMCO | Algae |
| Leathery Macrophytes: Other | OMCO2 | Algae |
| Other crustose macroalgae 1 | OMCR1 | Algae |
| Other crustose macroalgae 2 | OMCR2 | Algae |
| Other crustose macroalgae 3 | OMCR3 | Algae |
| Other crustose macroalgae 4 | OMCR4 | Algae |
| Other macroalgae (corticada) | OMCT | Algae |
| Other Leaves macroalgae | OMFC | Algae |
| Other Leaves macroalgae 2 | OMFC2 | Algae |
| Macroalgae: Filamentous / filiform | OMFL1 | Algae |
| Macroalgae: Other Filamentous 2 | OMFL2 | Algae |
| Macroalgae: Other Filamentous 3 | OMFL3 | Algae |
| Macroalgae: Other Filamentous 4 | OMFL4 | Algae |
| Padina spp. | PAD | Algae |
| Padina gymnospora | PADG | Algae |
| Penicillus spp. | PEN | Algae |
| Peyssonnelia | PEY | Algae |
| Peyssonnelia capensis | PEYC | Algae |
| Pterocladiella | PTR | Algae |
| Rhodymenia Sp. | RHO | Algae |
| Sargassum | SARG | Algae |
| Stypopodium sp. | STY | Algae |
| Udotea spp. | UDO | Algae |
| Valonia ventricosa | VALV | Algae |
| Wrangelia | WRAN | Algae |